miRNEST 2.0, an integrative microRNA resource :: BLAST
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatgagc 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatgagc 37
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtggcgctatctatcctgagtt 127
||||||||||||||||||||||
Sbjct: 89 gtggcgctatctatcctgagtt 110
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 4 atctgttaagctcaggagggatagcgccatgagc 37
||||||||||||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatgagc 37
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtggcgctatctatcctgagtt 127
||||||||||||||||||||||
Sbjct: 93 gtggcgctatctatcctgagtt 114
>41237_csi-MIR390:mirbase
Length = 154
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 11 agaatctgttaagctcaggagggatagcgccatg 44
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 tggcgctatctatcctgagtttcacgggttcttc 140
|||||||||| ||||||||||||| || ||||||
Sbjct: 96 tggcgctatccatcctgagtttcatggcttcttc 129
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatg 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatctatcctgagtttcacgggttcttc 140
|||||||| ||||||||||||| ||||||||
Sbjct: 94 gcgctatccatcctgagtttcatcggttcttc 125
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatg 38
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatctatcctgagtttcacgggttcttc 140
|||||||| ||||||||||||| ||||||||
Sbjct: 91 gcgctatccatcctgagtttcatcggttcttc 122
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgcc 31
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgcc 31
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 106 gtggcgctatctatcctgagtttca 130
||||||||||| |||||||||||||
Sbjct: 76 gtggcgctatccatcctgagtttca 100
>40072_ath-MIR390a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatga 35
||||||||| |||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatga 42
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 tggcgctatctatcctgagtttca 130
|||||||||| |||||||||||||
Sbjct: 67 tggcgctatccatcctgagtttca 90
>39862_aly-MIR390a:mirbase
Length = 129
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatga 35
||||||||| |||||||||||||||||||||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagcgccatga 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 tggcgctatctatcctgagtttca 130
|||||||||| |||||||||||||
Sbjct: 78 tggcgctatccatcctgagtttca 101
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tggcgctatctatcctgagtttcacgggttcttc 140
|||||||||||||||||||||||| |||||||||
Sbjct: 77 tggcgctatctatcctgagtttcatgggttcttc 110
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccat 33
||||||||| |||||||||||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagcgccat 43
>40468_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatg 34
>40467_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccatg 34
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatg 34
>40293_bna-MIR390b:mirbase
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagcgccat 33
||||||||| |||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 ctgttaagctcaggagggatagcgccat 33
||||||||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgccat 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatctatcctgagtttcacgggttcttc 140
|||||||| ||||||||||||| ||||||||
Sbjct: 88 gcgctatccatcctgagtttcatcggttcttc 119
>40705_mtr-MIR390:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 ctgttaagctcaggagggatagcgccat 33
||||||||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgccat 28
>40371_rco-MIR390a:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ctgttaagctcaggagggatagcgcc 31
||||||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 gtggcgctatctatcctgagtttcac 131
||||||||||| ||||||||||||||
Sbjct: 79 gtggcgctatccatcctgagtttcac 104
>40294_bna-MIR390c:mirbase
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 ctgttaagctcaggagggatagcgccatga 35
|||| |||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccatga 47
>40372_rco-MIR390b:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 taagctcaggagggatagcgccatg 34
|||||||||||||||||||||||||
Sbjct: 5 taagctcaggagggatagcgccatg 29
>40292_bna-MIR390a:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 ctgttaagctcaggagggatagcgccatg 34
|||| ||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
>39863_aly-MIR390b:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatga 35
|||||||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgccatga 43
>40469_gma-MIR390b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgttaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>40073_ath-MIR390b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatg 34
||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatg 38
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccat 33
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgcc 31
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
