miRNEST 2.0, an integrative microRNA resource :: BLAST
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 73/84 (86%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 2 gaggaggcatccaaagggatcgcattgatcccaa---act---ctccatgtctttggatc 55
|||||||||||||||||||||||||||||||||| || | |||| ||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcccaagtgtctgtcccccataattttggatc 61
Query: 56 atgctatccctttggattcctcct 79
||||||||||||||||||||||||
Sbjct: 62 atgctatccctttggattcctcct 85
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 71.9 bits (36), Expect = 7e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 48 tttggatcatgctatccctttggattcctcctttgg 83
||||||||||||||||||||||||||||||||||||
Sbjct: 75 tttggatcatgctatccctttggattcctcctttgg 110
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 2 gaggaggcatccaaagggatcgcattgatcc 32
|||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
>40470_gma-MIR393:mirbase
Length = 120
Score = 71.9 bits (36), Expect = 7e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ggaggaggcatccaaagggatcgcattgatcccaaa 36
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggaggcatccaaagggatcgcattgatcccaaa 36
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 ggatcatgctatccctttggattcctccttt 81
||||||||||||||||||||||| |||||||
Sbjct: 90 ggatcatgctatccctttggatttctccttt 120
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%), Gaps = 5/83 (6%)
Strand = Plus / Plus
Query: 2 gaggaggcatccaaagggatcgcattgatcccaa-----actctccatgtctttggatca 56
|||||||||||||||||||||||||||||||| | || |||| |||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcccgagtgtccctggccataattttggatca 61
Query: 57 tgctatccctttggattcctcct 79
|||||||||||||||||||||||
Sbjct: 62 tgctatccctttggattcctcct 84
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 6 aggcatccaaagggatcgcattgatcccaaa 36
|||||||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatcccaaa 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 ggatcatgctatccctttggattc 74
||||||||||||||||||||||||
Sbjct: 94 ggatcatgctatccctttggattc 117
>40706_mtr-MIR393:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 2 gaggaggcatccaaagggatcgcattgatcc 32
|||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ggatcatgctatccctttggattcctccttt 81
||||||||| ||||||||||||| |||||||
Sbjct: 96 ggatcatgccatccctttggatttctccttt 126
>42566_sbi-MIR393:mirbase
Length = 139
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ggaggaggcatccaaagggatcgcattgatcc 32
|||||| |||||||||||||||||||||||||
Sbjct: 10 ggaggaagcatccaaagggatcgcattgatcc 41
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gcatccaaagggatcgcattgatcc 32
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gcatccaaagggatcgcattgatcc 32
|||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcc 57
>40075_ath-MIR393a:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 48 tttggatcatgctatccctttggattcctcctt 80
|||||||||||||||| |||||||||| |||||
Sbjct: 100 tttggatcatgctatctctttggattcatcctt 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 atccaaagggatcgcattgatcc 32
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>39866_aly-MIR393b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gcatccaaagggatcgcattgatcc 32
|||||||||||||||||||||||||
Sbjct: 15 gcatccaaagggatcgcattgatcc 39
>39865_aly-MIR393a:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 48 tttggatcatgctatccctttggattcctcctt 80
|||||||||||||||| |||||||||| |||||
Sbjct: 107 tttggatcatgctatctctttggattcatcctt 139
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 atccaaagggatcgcattgatcc 32
|||||||||||||||||||||||
Sbjct: 17 atccaaagggatcgcattgatcc 39
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatccca 34
||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatccca 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 ttggatcatgctatccctt 67
|||||||||||||||||||
Sbjct: 92 ttggatcatgctatccctt 110
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 atccaaagggatcgcattgatcc 32
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 atgctatccctttggattcctcctt 80
||||||||||| |||||||||||||
Sbjct: 86 atgctatccctctggattcctcctt 110
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 atccaaagggatcgcattgatcc 32
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26