miRNEST 2.0, an integrative microRNA resource :: BLAST
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 gtgtcctacaggagtgacctgagaatcacatgcccgcatcacccatctttgctctcatgt 60
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gtgtcctacaggtgtgacctgagaatcacatgcccgcaccacccatctttgctctcatgt 60
Query: 61 gttctcaggtcgcccctgctggactccc 88
||||||||||||||||||||||||||||
Sbjct: 61 gttctcaggtcgcccctgctggactccc 88
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 ctcatgtgttctcaggtcgcccctgctg 81
||||||||||||||||||||||||||||
Sbjct: 58 ctcatgtgttctcaggtcgcccctgctg 85
>42645_tae-MIR398:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 ctcatgtgttctcaggtcgcccctgctgga 83
||||||||||||||||||||||| ||||||
Sbjct: 81 ctcatgtgttctcaggtcgcccccgctgga 110
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tcatgtgttctcaggtcgcccctgc 79
|||||||||||||||||||||||||
Sbjct: 53 tcatgtgttctcaggtcgcccctgc 77
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 tctcatgtgttctcaggtcgcccctgctg 81
|||| ||||||||||||||||||||||||
Sbjct: 57 tctcgtgtgttctcaggtcgcccctgctg 85
>40382_rco-MIR398b:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tcatgtgttctcaggtcgcccctgc 79
|||||||||||||||||||||||||
Sbjct: 98 tcatgtgttctcaggtcgcccctgc 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ctacaggagtgacctgagaatcacatg 32
||||||||| |||||||||||||||||
Sbjct: 1 ctacaggagcgacctgagaatcacatg 27
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>41801_bdi-MIR398c:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccctg 107
>41799_bdi-MIR398a:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 94 catgtgttctcaggtcgcccctg 116
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccctgc 79
|||||||||||||||||||||||
Sbjct: 84 atgtgttctcaggtcgcccctgc 106
>40091_ath-MIR398c:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 55 tcatgtgttctcaggtcgcccctgctg 81
||||||||||||||||| |||||||||
Sbjct: 82 tcatgtgttctcaggtcacccctgctg 108
>40090_ath-MIR398b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 55 tcatgtgttctcaggtcgcccctgctg 81
||||||||||||||||| |||||||||
Sbjct: 83 tcatgtgttctcaggtcacccctgctg 109
>42040_osa-MIR398b:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79
>39882_aly-MIR398b:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctgctg 81
|||||||||||||||| |||||||||
Sbjct: 89 catgtgttctcaggtcacccctgctg 114
>42818_zma-MIR398b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccc 76
|||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccc 105
>42817_zma-MIR398a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccc 76
|||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 53 tctcatgtgttctcaggtcgcccc 76
|||||||||||||||| |||||||
Sbjct: 25 tctcatgtgttctcagttcgcccc 2
>42588_sbi-MIR398:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccc 76
|||||||||||||||||||||
Sbjct: 86 catgtgttctcaggtcgcccc 106
