miRNEST 2.0, an integrative microRNA resource :: BLAST
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 62 cattcttgtagtgtgccctctgccaaaggagatttgcccggcaattctt 110
||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cattcatgtggtgtgccctctgccaaaggagatttgcccggcaattctt 123
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 71 agtgtgccctctgccaaaggagatttgcccggcaattcttct 112
||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 71 agtgtgccctctgccaaaggagatttgtccggcaaatcttct 112
>41246_csi-MIR399a:mirbase
Length = 155
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 71 agtgtgccctctgccaaaggagatttgcccggcaattc 108
|||||||| |||||||||||||||||||||||||||||
Sbjct: 103 agtgtgccttctgccaaaggagatttgcccggcaattc 140
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 70 tagtgtgccctctgccaaaggagatttgcccggcaattcttc 111
||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 84 tagtgtgtcttctgccaaaggagatttgcccggcaattcttc 125
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagatttgcccggcaattcttc 111
||||||||||||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagatttgcccggcaattcttc 111
||||||||||||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
>39884_aly-MIR399a:mirbase
Length = 162
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaattcttct 112
|||||||||||||||||||||||| |||||||||
Sbjct: 110 ctctgccaaaggagatttgcccggtaattcttct 143
>40387_rco-MIR399e:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 71 agtgtgccctctgccaaaggagatttgcccggcaatt 107
|||||||| ||||||||||||||||||||| ||||||
Sbjct: 72 agtgtgccttctgccaaaggagatttgcccagcaatt 108
>40097_ath-MIR399f:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaattct 109
|||||||||||||||||||||||| ||||||
Sbjct: 85 ctctgccaaaggagatttgcccggtaattct 115
>40384_rco-MIR399b:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaat 106
||||||||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgcccggcaat 105
>40095_ath-MIR399d:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaattc 108
|||||||||||||||||||||| |||||||
Sbjct: 67 ctctgccaaaggagatttgccccgcaattc 96
>39887_aly-MIR399d:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaattc 108
|||||||||||||||||||||| |||||||
Sbjct: 81 ctctgccaaaggagatttgccccgcaattc 110
>40092_ath-MIR399a:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 80 tctgccaaaggagatttgcccggcaattcttct 112
||||||||||||||||||||| | |||||||||
Sbjct: 91 tctgccaaaggagatttgccctgtaattcttct 123
>39893_aly-MIR399j:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 82 tgccaaaggagatttgcccggcaattctt 110
||||||||||||||||||||| |||||||
Sbjct: 96 tgccaaaggagatttgcccggtaattctt 124
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaat 106
|||||||||||||||||||||| |||||
Sbjct: 78 ctctgccaaaggagatttgcccagcaat 105
>42046_osa-MIR399f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaat 106
|||||||||||||||||||||| |||||
Sbjct: 84 ctctgccaaaggagatttgcccagcaat 111
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaattc 108
|||||||||||||||||||| |||||||
Sbjct: 90 ctgccaaaggagatttgccccgcaattc 117
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaattc 108
|||||||||||||||||||| |||||||
Sbjct: 76 ctgccaaaggagatttgccccgcaattc 103
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 73 tgtgccctctgccaaaggagatttgcccggcaattc 108
||||| ||||||||| |||||||||||| |||||||
Sbjct: 92 tgtgctctctgccaatggagatttgcccagcaattc 127
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 70 tagtgtgccctctgccaaaggagatttgcccggcaattct 109
|||||||| ||||||||||||||||||||| || |||||
Sbjct: 83 tagtgtgcaatctgccaaaggagatttgcccagcgattct 122
>40299_bna-MIR399:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccgg 102
||||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgcccgg 101
>39892_aly-MIR399i:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaattc 108
|||||||||||||||||||| |||||||
Sbjct: 91 ctgccaaaggagatttgccccgcaattc 118
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaatt 107
|||||||||||||||||||| ||||||
Sbjct: 78 ctgccaaaggagatttgcccagcaatt 104
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 70 tagtgtgccctctgccaaaggagatttgccc 100
|||||||| |||||||||||||||||||||
Sbjct: 67 tagtgtgcaatctgccaaaggagatttgccc 97
>39890_aly-MIR399g:mirbase
Length = 157
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaatt 107
|||||||||||||||||||| ||||||
Sbjct: 110 ctgccaaaggagatttgccccgcaatt 136
>39889_aly-MIR399f:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 79 ctctgccaaaggagatttgcccggcaattct 109
|||||||||||||||||||||| | ||||||
Sbjct: 109 ctctgccaaaggagatttgccctgtaattct 139
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgccctctgccaaaggagatttgccc 100
||||||||||||||||||| ||||||
Sbjct: 75 tgccctctgccaaaggagagttgccc 100
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaat 106
|||||||||||||||||||| |||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42045_osa-MIR399e:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaat 106
|||||||||||||||||||| |||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 tctgccaaaggagatttgcccggcaattct 109
||||||||||||||||||||| || |||||
Sbjct: 93 tctgccaaaggagatttgcccagcgattct 122
>40385_rco-MIR399c:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagatttgcccggc 103
||||||||||||||||||||||
Sbjct: 71 tgccaaaggagatttgcccggc 92
>40096_ath-MIR399e:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 cctctgccaaaggagatttgcc 99
||||||||||||||||||||||
Sbjct: 75 cctctgccaaaggagatttgcc 96
>39888_aly-MIR399e:mirbase
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 cctctgccaaaggagatttgcc 99
||||||||||||||||||||||
Sbjct: 114 cctctgccaaaggagatttgcc 135
>42050_osa-MIR399j:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 76 gccctctgccaaaggagatttgccc 100
|||||||||||||||||| ||||||
Sbjct: 70 gccctctgccaaaggagagttgccc 94
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tctgccaaaggagatttgccc 100
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>39891_aly-MIR399h:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagatttgcccgg 102
|||||||||||||||||||||
Sbjct: 82 tgccaaaggagatttgcccgg 102
>42823_zma-MIR399e:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 ccctctgccaaaggagatttgccc 100
||||||||||||||||| ||||||
Sbjct: 80 ccctctgccaaaggagagttgccc 103
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgccc 100
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41673_vvi-MIR399f:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 81 ctgccaaaggagatttgcccggcaattcttct 112
||||| ||||||||||| || |||||||||||
Sbjct: 75 ctgccgaaggagatttgtcctgcaattcttct 106
