miRNEST 2.0, an integrative microRNA resource :: BLAST
>41453_ptc-MIR399f:mirbase
Length = 101
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 45 tgcatacttctgttttgccaaaggagaattgccctgccattcg 87
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 57 tgcatatttctgttttgccaaaggagaattgccctgccattcg 99
>41152_tcc-MIR399g:mirbase
Length = 112
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 50 acttctgttttgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||||||||||||||||||
Sbjct: 62 acttctgttttgccaaaggagaattgccctgccattc 98
>40739_mtr-MIR399i:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 42 acatgcatacttctgttttgccaaaggagaattgccctgccatt 85
|||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 47 acatgcatgcttctggtttgccaaaggagatttgccctgccatt 90
>40738_mtr-MIR399h:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 42 acatgcatacttctgttttgccaaaggagaattgccctgccatt 85
|||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 47 acatgcatgcttctggtttgccaaaggagatttgccctgccatt 90
>41250_csi-MIR399e:mirbase
Length = 154
Score = 60.0 bits (30), Expect = 3e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 45 tgcatacttctgttttgccaaaggagaattgccctgccattc 86
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 4 tgcatccttctgttt-gccaaaggagaattgccctgccattc 44
>41248_csi-MIR399c:mirbase
Length = 149
Score = 60.0 bits (30), Expect = 3e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 45 tgcatacttctgttttgccaaaggagaattgccctgccattc 86
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 95 tgcatccttctgttt-gccaaaggagaattgccctgccattc 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 aggaataacagtgcaatcctcctttggc 28
||||||||||||||| ||||||||||||
Sbjct: 26 aggaataacagtgcagtcctcctttggc 53
>42819_zma-MIR399a:mirbase
Length = 123
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 ttgccaaaggagaattgccctgccattc 86
||||||||||||||||||||||||||||
Sbjct: 83 ttgccaaaggagaattgccctgccattc 110
>42596_sbi-MIR399h:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattcg 87
||||||||||||||||||||||||||||
Sbjct: 93 tgccaaaggagaattgccctgccattcg 120
>41803_bdi-MIR399b:mirbase
Length = 160
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 ttgccaaaggagaattgccctgccattc 86
||||||||||||||||||||||||||||
Sbjct: 109 ttgccaaaggagaattgccctgccattc 136
>42042_osa-MIR399b:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||||||||
Sbjct: 67 tgccaaaggagaattgccctgccattc 93
>41454_ptc-MIR399g:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||||||||
Sbjct: 65 tgccaaaggagaattgccctgccattc 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 3 gaataacagtgcaatcctcctttggcaga 31
||||||| ||||||| |||||||||||||
Sbjct: 5 gaataactgtgcaattctcctttggcaga 33
>41150_tcc-MIR399e:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 gccaaaggagaattgccctgccattc 86
||||||||||||||||||||||||||
Sbjct: 78 gccaaaggagaattgccctgccattc 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 gaataacagtgcaatcctcctttggcagaaa 33
||||||||| ||||| |||||||||||||||
Sbjct: 13 gaataacagcgcaattctcctttggcagaaa 43
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 57 ttttgccaaaggagaattgccctgccattc 86
||||||||||||||| ||||||||||||||
Sbjct: 64 ttttgccaaaggagatttgccctgccattc 93
>40733_mtr-MIR399c:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 ttctgttttgccaaaggagaattgccctgccatt 85
||||| |||||||||||||| |||||||||||||
Sbjct: 72 ttctggtttgccaaaggagatttgccctgccatt 105
>42589_sbi-MIR399a:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattcgc 88
|||||||||||||||||||||| ||||||
Sbjct: 97 tgccaaaggagaattgccctgcgattcgc 125
>42598_sbi-MIR399j:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 ttgccaaaggagaattgccctgcc 82
||||||||||||||||||||||||
Sbjct: 70 ttgccaaaggagaattgccctgcc 93
>41151_tcc-MIR399f:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 47 catacttctgttttgccaaaggagaattgccctgccattc 86
|||| |||| |||||||| |||||| ||||||||||||||
Sbjct: 58 catagttctattttgccagaggagatttgccctgccattc 97
>42826_zma-MIR399h:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ttgccaaaggagaattgccctgc 81
|||||||||||||||||||||||
Sbjct: 72 ttgccaaaggagaattgccctgc 94
>42821_zma-MIR399c:mirbase
Length = 207
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||| ||||
Sbjct: 168 tgccaaaggagaattgccctgcgattc 194
>42591_sbi-MIR399c:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||| ||||
Sbjct: 91 tgccaaaggagaattgccctgcgattc 117
>42043_osa-MIR399c:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattc 86
|||||||||||||||||||||| ||||
Sbjct: 80 tgccaaaggagaattgccctgcgattc 106
>42041_osa-MIR399a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgc 81
||||||||||||||||||||||
Sbjct: 119 tgccaaaggagaattgccctgc 140
>41668_vvi-MIR399a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 3 gaataacagtgcaatcctcctttggcaga 31
||||||||| ||||| |||||||||||||
Sbjct: 93 gaataacagggcaattctcctttggcaga 65
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctg 80
|||||||||||||||||||||
Sbjct: 67 tgccaaaggagaattgccctg 87
>42822_zma-MIR399d:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgccattcg 87
|||||||||||| ||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctgccattcg 113
>41802_bdi-MIR399:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 tgccaaaggagaattgccctgcca 83
||||||||||||||| ||||||||
Sbjct: 73 tgccaaaggagaattaccctgcca 96
>40741_mtr-MIR399k:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 58 tttgccaaaggagaattgccctgccatt 85
|||||||||| ||| |||||||||||||
Sbjct: 67 tttgccaaagaagatttgccctgccatt 94
