miRNEST 2.0, an integrative microRNA resource :: BLAST
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgactacttc 122
||||||||||||||||||||||||| ||||
Sbjct: 88 gccaaaggagagttgccctgtgactgcttc 117
>41249_csi-MIR399d:mirbase
Length = 130
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgactacttc 122
||||||||||||||||||||||||| ||||
Sbjct: 101 gccaaaggagagttgccctgtgactgcttc 130
>39886_aly-MIR399c:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgactacttc 122
||||||||||||||||||||| ||||||||
Sbjct: 90 gccaaaggagagttgccctgtcactacttc 119
>41247_csi-MIR399b:mirbase
Length = 168
Score = 50.1 bits (25), Expect = 4e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 3 tagttgtagggcttctctccttctggcaggagatggc 39
|||||||||||||||||||||| ||||||| ||||||
Sbjct: 17 tagttgtagggcttctctcctt-tggcaggtgatggc 52
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 84 caatgacccgccaaaggagagttgccct 111
|||||||| |||||||||||||||||||
Sbjct: 117 caatgacctgccaaaggagagttgccct 144
>40383_rco-MIR399a:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgact 117
|||||||||||||||||||||||||
Sbjct: 69 gccaaaggagagttgccctgtgact 93
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgac 116
||||||||||||||||||||||||
Sbjct: 118 gccaaaggagagttgccctgtgac 141
>40093_ath-MIR399b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 aatgacccgccaaaggagagttgccctg 112
||||||| ||||||||||||||||||||
Sbjct: 98 aatgacctgccaaaggagagttgccctg 125
>41459_ptc-MIR399l:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 acccgccaaaggagagttgccct 111
|||||||||||||||||||||||
Sbjct: 78 acccgccaaaggagagttgccct 100
>39885_aly-MIR399b:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 86 atgacccgccaaaggagagttgccctg 112
|||||| ||||||||||||||||||||
Sbjct: 100 atgacctgccaaaggagagttgccctg 126
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtg 114
||||||||||||||||||||||
Sbjct: 53 gccaaaggagagttgccctgtg 74
>41192_aqc-MIR399:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgacta 118
||||||||||||||||||| ||||||
Sbjct: 73 gccaaaggagagttgccctatgacta 98
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tagttgtagggcttctctcctt 24
||||||||||||||||||||||
Sbjct: 15 tagttgtagggcttctctcctt 36
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 cgccaaaggagagttgccctgt 113
||||||||||||||||||||||
Sbjct: 96 cgccaaaggagagttgccctgt 117
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtg 114
||||||||||||||||||||||
Sbjct: 55 gccaaaggagagttgccctgtg 76
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtg 114
||||||||||||||||||||||
Sbjct: 55 gccaaaggagagttgccctgtg 76
>40094_ath-MIR399c:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgactacttc 122
||||||||||||||||||||| ||| ||||
Sbjct: 85 gccaaaggagagttgccctgtcactgcttc 114
>42823_zma-MIR399e:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgt 113
|||||||||||||||||||||
Sbjct: 86 gccaaaggagagttgccctgt 106
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgt 113
|||||||||||||||||||||
Sbjct: 83 gccaaaggagagttgccctgt 103
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgact 117
|||||||||||||||||||| ||||
Sbjct: 167 gccaaaggagagttgccctgcgact 191
>42044_osa-MIR399d:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgact 117
|||||||||||||||||||| ||||
Sbjct: 257 gccaaaggagagttgccctgcgact 281
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgact 117
||||||||||||||||||| |||||
Sbjct: 80 gccaaaggagagttgccctatgact 104
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgt 113
|||||||||||||||||||||
Sbjct: 90 gccaaaggagagttgccctgt 110
>40386_rco-MIR399d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgact 117
|||||||||||| ||||||||||||
Sbjct: 79 gccaaaggagagctgccctgtgact 103
>42828_zma-MIR399j:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctg 112
||||||||||||||||||||
Sbjct: 155 gccaaaggagagttgccctg 174
>42827_zma-MIR399i:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctg 112
||||||||||||||||||||
Sbjct: 71 gccaaaggagagttgccctg 90
>41455_ptc-MIR399h:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtgac 116
|||||||||||||| |||||||||
Sbjct: 104 gccaaaggagagtttccctgtgac 127
