miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41688_vvi-MIR535a:mirbase
          Length = 101

 Score =  200 bits (101), Expect = 1e-52
 Identities = 101/101 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtaattgcttgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgtaattgcttgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgact 60

                                                    
Query: 61  gtgtacaggcgtgctctctctcgctgtcatacaatcttctc 101
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtacaggcgtgctctctctcgctgtcatacaatcttctc 101




>41690_vvi-MIR535c:mirbase
          Length = 101

 Score =  184 bits (93), Expect = 8e-48
 Identities = 99/101 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtaattgcttgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgact 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1   tgtaattgcttgacaacgagagagagcacgctagtctgcattcatgcgaggaacatgact 60

                                                    
Query: 61  gtgtacaggcgtgctctctctcgctgtcatacaatcttctc 101
           ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61  gtgtacaggcgtgctctctgtcgctgtcatacaatcttctc 101




>41159_tcc-MIR535:mirbase
          Length = 120

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 71/82 (86%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                      
Query: 10 ttgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgactgtgtacagg 69
          ||||||||||||||||||||||| ||  |||||| ||| ||| |||||  |||||||| |
Sbjct: 99 ttgacaacgagagagagcacgctcgttggcattcttgcaagg-acatggatgtgtacaag 41

                                
Query: 70 cgtgctctctctcgctgtcata 91
          |||||||||| ||| |||||||
Sbjct: 40 cgtgctctctatcgttgtcata 19




>41206_aqc-MIR535:mirbase
          Length = 87

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 74/87 (85%), Gaps = 6/87 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgacaacgagagagagcacgctagtcagcattcatgc-gagga-----acatgactgtgt 64
          ||||||||||||||||||||| |||| |||||||||| |||||     | |||||||| |
Sbjct: 1  tgacaacgagagagagcacgcgagtcggcattcatgcagaggatatataaatgactgtct 60

                                     
Query: 65 acaggcgtgctctctctcgctgtcata 91
          ||| ||||||| ||||||| |||||||
Sbjct: 61 acatgcgtgctttctctcgttgtcata 87




>40392_rco-MIR535:mirbase
          Length = 91

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 10 ttgacaacgagagagagcacgctagtcagcattcatgcgaggaacatg 57
          ||||||||||||||||||||||| || ||| ||||||  |||||||||
Sbjct: 5  ttgacaacgagagagagcacgcttgttagccttcatgtaaggaacatg 52




>39520_ppt-MIR535c:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgacaacgagagagagcacgct 32
          ||||||||||||||||||||||
Sbjct: 2  tgacaacgagagagagcacgct 23




>39519_ppt-MIR535b:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgacaacgagagagagcacgct 32
          ||||||||||||||||||||||
Sbjct: 2  tgacaacgagagagagcacgct 23




>39518_ppt-MIR535a:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgacaacgagagagagcacgct 32
          ||||||||||||||||||||||
Sbjct: 27 tgacaacgagagagagcacgct 48




>39387_pab-MIR535:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 64 tacaggcgtgctctctctcgctgtca 89
          |||||||||||||||||||| |||||
Sbjct: 49 tacaggcgtgctctctctcgttgtca 24



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgacaacgagagagagcacgc 31
          |||||||||||||||||||||
Sbjct: 24 tgacaacgagagagagcacgc 44




>42109_osa-MIR535:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgacaacgagagagagcacgc 31
          |||||||||||||||||||||
Sbjct: 6  tgacaacgagagagagcacgc 26




>39521_ppt-MIR535d:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgacaacgagagagagcacgc 31
          |||||||||||||||||||||
Sbjct: 3  tgacaacgagagagagcacgc 23