miRNEST 2.0, an integrative microRNA resource :: BLAST
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 77.8 bits (39), Expect = 1e-15
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatccgagaagcgtgccgctgtggccggc-tgcttcctgg 68
|||||||||||||||||||||||| ||||||| || | ||| | ||| || ||||||
Sbjct: 30 ctgcctggctccctgaatgccatctgagaagcacaccaccgtgcctggcgtggctcctgg 89
Query: 69 ttggcattgagggagtcatgcagggtt 95
|||||||||||||||||||||||||||
Sbjct: 90 ttggcattgagggagtcatgcagggtt 116
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatccgaga 38
||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgaatgccatccgaga 28
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 67 ggttggcattgagggagtcatgcagg 92
||||||| ||||||||||||||||||
Sbjct: 63 ggttggcgttgagggagtcatgcagg 88
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatccgagaagc 41
||||||||||||||||||||||| |||||||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagc 36
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccatc 43
>40341_rco-MIR160c:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 5 ctgcctggctccctgaatgccatc 28
>40399_ahy-MIR160:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccat 32
|||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42
>40398_ahy-MIR160:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccat 32
|||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42
>40312_bra-MIR160a:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatcc 34
|||||||||||||| |||||||||
Sbjct: 26 tgcctggctccctgtatgccatcc 49
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatccgagaagc 41
||||||||||||||| |||||| | |||||||
Sbjct: 12 ctgcctggctccctgtatgccacctgagaagc 43
>39731_smo-MIR160a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||| ||||||||
Sbjct: 10 ctgcctggctccctgtatgccatc 33
>39375_pab-MIR160b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||| ||||||||
Sbjct: 19 ctgcctggctccctgtatgccatc 42
