miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42132_osa-MIR810b:mirbase
Length = 223
Score = 442 bits (223), Expect = e-125
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 1 agcccaccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcccaccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatg 60
Query: 61 acgacgtatatcggtgttcgctatatatactatctactggtaagtatatctttaatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgacgtatatcggtgttcgctatatatactatctactggtaagtatatctttaatatac 120
Query: 121 ttaccagtagatagtatatatagtgaacaccgatatgcgtcatcatcaagtgatttaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaccagtagatagtatatatagtgaacaccgatatgcgtcatcatcaagtgatttaatt 180
Query: 181 atgccgttagttaagcatgcgagccacatgtggtgagcttacg 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgccgttagttaagcatgcgagccacatgtggtgagcttacg 223
Score = 256 bits (129), Expect = 6e-69
Identities = 194/215 (90%), Gaps = 8/215 (3%)
Strand = Plus / Minus
Query: 5 caccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatgacga 64
||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct: 215 caccacatgtggctcgcatgcttaa----ctaacggcataattaaatcacttgatgatga 160
Query: 65 cgtatatcggtgttcgctatatatactatctactggtaagtatatctttaatatacttac 124
|| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 159 cgcatatcggtgttcactatatatactatctactggtaagtatattaaagatatacttac 100
Query: 125 cagtagatagtatatatagtgaacaccgatatgcgtcatcatcaagtgatttaattatgc 184
||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||
Sbjct: 99 cagtagatagtatatatagcgaacaccgatatacgtcgtcatcaagtgatctaattatgc 40
Query: 185 cgttag----ttaagcatgcgagccacatgtggtg 215
|||||| |||||||||||||||||||||||||
Sbjct: 39 cgttagttatttaagcatgcgagccacatgtggtg 5
>42130_osa-MIR810a:mirbase
Length = 237
Score = 216 bits (109), Expect = 5e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 agcccaccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 agcccaccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatg 85
Query: 61 acgacgtatatcggtgttcgctatatatactatctactggtaagtatat 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 acgacgtatatcggtgttcgctatatatactatctactggtaagtatat 134
Score = 172 bits (87), Expect = 7e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 133 agtatatatagtgaacaccgatatgcgtcatcatcaagtgatttaattatgccgttagtt 192
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 agtatatatagcgaacaccgatatgcgtcatcatcaagtgatttaattatgccgttagtt 187
Query: 193 aagcatgcgagccacatgtggtgagcttacg 223
|||||||||||||||||||||||||||||||
Sbjct: 188 aagcatgcgagccacatgtggtgagcttacg 218
Score = 147 bits (74), Expect = 4e-36
Identities = 102/111 (91%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 115 atatacttaccagtagatagtatatatagtgaacaccgatatgcgtcatcatcaagtgat 174
||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 134 atatacttaccagtagatagtatatatagcgaacaccgatatacgtcgtcatcaagtgat 75
Query: 175 ttaattatgccgttag----ttaagcatgcgagccacatgtggtgagctta 221
||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 74 ctaattatgccgttagttatttaagcatgcgagccacatgtggtgggctta 24
Score = 115 bits (58), Expect = 1e-26
Identities = 80/87 (91%), Gaps = 4/87 (4%)
Strand = Plus / Minus
Query: 5 caccacatgtggctcgcatgcttaaataactaacggcataattagatcacttgatgacga 64
||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct: 210 caccacatgtggctcgcatgcttaa----ctaacggcataattaaatcacttgatgatga 155
Query: 65 cgtatatcggtgttcgctatatatact 91
|| ||||||||||||||||||||||||
Sbjct: 154 cgcatatcggtgttcgctatatatact 128
