miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42136_osa-MIR811d:mirbase
Length = 156
Score = 309 bits (156), Expect = 3e-85
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1 tggaaactactgttagatcgaacaatagacgtccgagattcgtctacttcatcacgagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaaactactgttagatcgaacaatagacgtccgagattcgtctacttcatcacgagta 60
Query: 61 aaagttttattaacggatttactgcaagtaaaatttttactcttgatgatgtggacggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagttttattaacggatttactgcaagtaaaatttttactcttgatgatgtggacggat 120
Query: 121 ctcggatgtccattttttatccaaaggtagtttcca 156
||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcggatgtccattttttatccaaaggtagtttcca 156
>42382_osa-MIR2862:mirbase
Length = 221
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 82 ctgcaagtaaaatttttactcttgatgatgtggacggatctc 123
|||| |||||||||||||||| |||||| ||||||| |||||
Sbjct: 134 ctgcgagtaaaatttttactcgtgatgacgtggacgaatctc 175
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 35 gagattcgtctacttcatcacgagtaaaagtttta 69
|||||||||| || ||||||||||||||| |||||
Sbjct: 175 gagattcgtccacgtcatcacgagtaaaaatttta 141
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 89 taaaatttttactcttgatgatgtggacggatct 122
|||||||||||||| |||||| ||||||| ||||
Sbjct: 70 taaaatttttactcatgatgacgtggacgaatct 37
>42134_osa-MIR811b:mirbase
Length = 190
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 aaactactgttagatcgaacaatagacgtccgagattcgtc 44
||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 11 aaactaccgttagatcgagaaatggacgtccgagattcgtc 51
>42133_osa-MIR811a:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 aaactactgttagatcgaacaatagacgtccgagattcgt 43
||||||| |||||||||| ||| ||||||||||||||||
Sbjct: 11 aaactaccgttagatcgagaaatggacgtccgagattcgt 50
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1 tggaaactactgttagatcgaacaatagacgtccgagattcgtc 44
||||||||| ||| |||||| ||| |||||||||||||||||
Sbjct: 183 tggaaactaacgttggatcgagaaatggacgtccgagattcgtc 140
>42135_osa-MIR811c:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 aatagacgtccgagattcgtc 44
|||||||||||||||||||||
Sbjct: 144 aatagacgtccgagattcgtc 124
