miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42138_osa-MIR812a:mirbase
          Length = 234

 Score =  109 bits (55), Expect = 7e-25
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
           |||||||||||||||||||||| ||||||||| || |||| || || ||| |||||| | 
Sbjct: 82  attactatttttattgttattacatgataaaacatgaatagtattttatgtgtgactaat 141

                                                                       
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
           |||||       ||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 142 ttttttaaaaattttcataaatttttcaaataagacggacggttaaacgttggacacgga 201



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  accgtccgtcttatttgaaaa 40
           |||||||||||||||||||||
Sbjct: 184 accgtccgtcttatttgaaaa 164




>42139_osa-MIR812b:mirbase
          Length = 170

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 94/110 (85%), Gaps = 2/110 (1%)
 Strand = Plus / Minus

                                                                       
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
           |||| ||||||||||||||||||||||||||| || |||||||||| ||||||||||  |
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact--a 63

                                                             
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgt 157
           |||||       |||||||||||||| |||||||||| ||||| ||||||
Sbjct: 62  tttttttaatcttttcataaaattttcaaataagacgaacggtcaaacgt 13



 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 126 aaaatttttaaataagacggacggttaaacgttggacacg 165
           |||||||| |||||||||||||||||||||||||||||||
Sbjct: 126 aaaattttcaaataagacggacggttaaacgttggacacg 165



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 16 tttgaccgtccgtcttatttgaaaa 40
          ||||||||| |||||||||||||||
Sbjct: 16 tttgaccgttcgtcttatttgaaaa 40




>42140_osa-MIR812c:mirbase
          Length = 164

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 137 ataagacggacggttaaacgttggacacggaaac 170
           ||||||||||||||||||||||||||||||||||
Sbjct: 130 ataagacggacggttaaacgttggacacggaaac 163



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 16 tttgaccgtccgtcttatttgaaaa 40
          ||||||||||| |||||||||||||
Sbjct: 18 tttgaccgtccatcttatttgaaaa 42




>42141_osa-MIR812d:mirbase
          Length = 153

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 134 taaataagacggacggttaaacgttggacacg 165
           ||||||||||||||||||||||||||||||||
Sbjct: 122 taaataagacggacggttaaacgttggacacg 153



 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
           |||| ||||||||||||| ||| ||||||||| || |||| ||||| |||||||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatactttatgcgtgactt 53




>42152_osa-MIR812n:mirbase
          Length = 203

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
           |||| ||||| ||||||||||||||||||||| || |||| ||||| ||| ||||||||
Sbjct: 66  attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 7   gtgcccaactttgaccgtccgtcttatttgaa 38
           |||||||||||||| |||| || |||||||||
Sbjct: 180 gtgcccaactttgatcgtctgtgttatttgaa 149




>42151_osa-MIR812n:mirbase
          Length = 203

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
           |||| ||||| ||||||||||||||||||||| || |||| ||||| ||| ||||||||
Sbjct: 66  attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 7   gtgcccaactttgaccgtccgtcttatttgaa 38
           |||||||||||||| |||| || |||||||||
Sbjct: 180 gtgcccaactttgatcgtctgtgttatttgaa 149




>42143_osa-MIR812f:mirbase
          Length = 179

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
           |||| |||||||||||||||||||| |||||| | ||||| ||||| ||| ||||||||
Sbjct: 53  attaatatttttattgttattagattataaaacacaaatagtactttatgtgtgactta 111




>42154_osa-MIR812o:mirbase
          Length = 173

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                       
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
           |||| |||||||||| || ||||||||||||| || |||| ||||| |||| ||||||| 
Sbjct: 50  attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109

                                                                       
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
            ||||       ||||||||  ||||||||||| | | ||||| ||| ||| ||||||||
Sbjct: 110 ctttttaatttttttcataatttttttaaataaaatgaacggtcaaatgttagacacgga 169

              
Query: 168 aac 170
           |||
Sbjct: 170 aac 172




>42153_osa-MIR812o:mirbase
          Length = 173

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                       
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
           |||| |||||||||| || ||||||||||||| || |||| ||||| |||| ||||||| 
Sbjct: 50  attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109

                                                                       
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
            ||||       ||||||||  ||||||||||| | | ||||| ||| ||| ||||||||
Sbjct: 110 ctttttaatttttttcataatttttttaaataaaatgaacggtcaaatgttagacacgga 169

              
Query: 168 aac 170
           |||
Sbjct: 170 aac 172




>42147_osa-MIR812j:mirbase
          Length = 297

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 48  attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
           |||| |||||||||||||||||||| |||||| || |||| || || |||||||||||
Sbjct: 181 attagtatttttattgttattagattataaaacatgaatagtagtttatgcgtgactt 124



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                        
Query: 126 aaaatttttaaataagacggacggttaaacgttggacacggaaac 170
           |||| ||| |||||||||||| | ||||| |||||||||||||||
Sbjct: 187 aaaaatttcaaataagacggatgattaaa-gttggacacggaaac 230




>42150_osa-MIR812m:mirbase
          Length = 188

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 9  gcccaactttgaccgtccgtcttatttgaaa 39
          |||||||||||| ||||||||||||||||||
Sbjct: 17 gcccaactttgatcgtccgtcttatttgaaa 47



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 91/115 (79%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
           ||||| ||||||| |||| ||||||||| |||| ||||| |  |||||||||  ||||  
Sbjct: 66  tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatgttttta 125

                                                                  
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
                ||| | |||| || ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 126 attttttttaaaaaaattataaataagacgaacggttaaa-gttggacgcggaaa 179




>42149_osa-MIR812l:mirbase
          Length = 242

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaa 169
           ||||||||||||||| ||||||||| ||||||| ||||||
Sbjct: 167 tttttaaataagacgaacggttaaa-gttggacgcggaaa 205



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 48  attactatttttattgttattagatgataaaa 79
           |||| ||||||| ||||||| |||||||||||
Sbjct: 85  attaatatttttgttgttataagatgataaaa 116




>42144_osa-MIR812g:mirbase
          Length = 242

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 48  attactatttttattgttattagatgataaaatataaata 87
           |||| ||||||||||||||| |||| ||||||||| ||||
Sbjct: 155 attagtatttttattgttatgagataataaaatatgaata 116



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 130 tttttaaataagacggacggttaaa 154
           ||||||||||||||||||| |||||
Sbjct: 82  tttttaaataagacggacgattaaa 58




>42148_osa-MIR812k:mirbase
          Length = 226

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 93/116 (80%), Gaps = 2/116 (1%)
 Strand = Plus / Plus

                                                                       
Query: 54  atttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttn 113
           |||||| ||||||| ||||||||||| || |||| ||||| |   ||||||||  |||| 
Sbjct: 84  atttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatgttttt 143

                                                                   
Query: 114 nnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
                 ||||| ||||||||| ||||||||| ||||||||| ||||||| ||||||
Sbjct: 144 aaattttttcaaaaaattttt-aataagacgaacggttaaa-gttggacgcggaaa 197



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 16 tttgaccgtccgtcttatttgaaa 39
          ||||| ||||||||||||||||||
Sbjct: 44 tttgatcgtccgtcttatttgaaa 67




>42145_osa-MIR812h:mirbase
          Length = 187

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 53  tatttttattgttattagatgataaaatataaata 87
           ||||||||||||||| |||| ||||||| ||||||
Sbjct: 87  tatttttattgttatgagattataaaatttaaata 121