miRNEST 2.0, an integrative microRNA resource :: BLAST
>41997_osa-MIR393:mirbase
Length = 115
Score = 228 bits (115), Expect = 8e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 6 tggggaagcatccaaagggatcgcattgatccttcatcgctctcgctcgcttccatggcg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggggaagcatccaaagggatcgcattgatccttcatcgctctcgctcgcttccatggcg 60
Query: 66 gtcgtcgtctacaagcagcttgacggatcatgcgatccttttggaggcttcctct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgtcgtctacaagcagcttgacggatcatgcgatccttttggaggcttcctct 115
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 79.8 bits (40), Expect = 4e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 tgtcttggggaagcatccaaagggatcgcattgatccttc 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 tgtcttggggaagcatccaaagggatcgcattgatccttc 60
Score = 75.8 bits (38), Expect = 7e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 87 gacggatcatgcgatccttttggaggcttcctctagcc 124
||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gacggatcatgcgatccttttggaggcttcctctagcc 140
>42566_sbi-MIR393:mirbase
Length = 139
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 87 gacggatcatgcgatccttttggaggcttcctctag 122
||||||||||||||||||||||||||||||||||||
Sbjct: 96 gacggatcatgcgatccttttggaggcttcctctag 131
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 ggaagcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||||||
Sbjct: 13 ggaagcatccaaagggatcgcattgatcc 41
>39866_aly-MIR393b:mirbase
Length = 169
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 aagcatccaaagggatcgcattgatcct 38
||||||||||||||||||||||||||||
Sbjct: 13 aagcatccaaagggatcgcattgatcct 40
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcctt 39
|||||||||||||||||||||||||||
Sbjct: 18 gcatccaaagggatcgcattgatcctt 44
>40706_mtr-MIR393:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 4 cttggggaagcatccaaagggatcgcattgatcct 38
|||| ||| ||||||||||||||||||||||||||
Sbjct: 9 cttgaggaggcatccaaagggatcgcattgatcct 43
>40075_ath-MIR393a:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 ggaagcatccaaagggatcgcattgatcct 38
||||| ||||||||||||||||||||||||
Sbjct: 4 ggaaggatccaaagggatcgcattgatcct 33
>39865_aly-MIR393a:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 ggaagcatccaaagggatcgcattgatcct 38
||||| ||||||||||||||||||||||||
Sbjct: 11 ggaaggatccaaagggatcgcattgatcct 40
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||
Sbjct: 3 gcatccaaagggatcgcattgatcc 27
>40470_gma-MIR393:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 gcatccaaagggatcgcattgatcc 37
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41238_csi-MIR393:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atccaaagggatcgcattgatcct 38
||||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcct 43
>40076_ath-MIR393b:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atccaaagggatcgcattgatcct 38
||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcct 33
>42787_zma-MIR393b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatccttcat 42
|||||||||||||||||||||| ||||
Sbjct: 2 tccaaagggatcgcattgatccatcat 28
>40295_bna-MIR393:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatcct 38
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcct 23
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatcc 37
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tccaaagggatcgcattgatc 36
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
