miRNEST 2.0, an integrative microRNA resource :: BLAST
>42168_osa-MIR818e:mirbase
Length = 225
Score = 77.8 bits (39), Expect = 4e-15
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtct 76
|||||||||||||||||||||||||| || ||||| |||| | ||||||||||||||| |
Sbjct: 224 ctccgtcccataatataagggattttaagtttttgtttgt-attgtttgaccactcgttt 166
Query: 77 tattcaaataatttatgcaaata 99
|||||||| ||||| | ||||||
Sbjct: 165 tattcaaaaaatttgtacaaata 143
Score = 73.8 bits (37), Expect = 6e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| |||||||||| |||||
Sbjct: 63 aataagacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatattataggacg 4
Query: 244 g 244
|
Sbjct: 3 g 3
Score = 69.9 bits (35), Expect = 9e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 20 ccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtctta 78
|||||| |||||||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct: 3 ccgtcctataatataagggattttgagtttttgcttg-cactgtttgaccactcgtctta 61
Query: 79 ttcaaat 85
|| ||||
Sbjct: 62 tttaaat 68
Score = 63.9 bits (32), Expect = 6e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||| |||||||||||||| || || ||||||| |||||| ||||||||||||||||
Sbjct: 162 aataaaacgagtggtcaaacaatacaaacaaaaacttaaaatcccttatattatgggacg 221
Query: 244 gagg 247
||||
Sbjct: 222 gagg 225
>42167_osa-MIR818d:mirbase
Length = 139
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggatttt 43
||||||||||| |||||||||||||||||||||
Sbjct: 14 ttactctctccatcccataatataagggatttt 46
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggatttt 43
||||| ||||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataagggatttt 96
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
|||||| |||||||||||||||||||||||||
Sbjct: 96 aaaatcccttatattatgggacggagggagta 127
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 221 aaaatcacttatattatgggacggagggagtaa 253
|||||| |||||||||||||| |||| ||||||
Sbjct: 46 aaaatcccttatattatgggatggagagagtaa 14
>42164_osa-MIR818a:mirbase
Length = 144
Score = 58.0 bits (29), Expect = 4e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttgagt 47
|||||||||||||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggattttgagt 111
Score = 50.1 bits (25), Expect = 9e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 217 actcaaaatcacttatattatgggacgga 245
|||||||||| ||||||||||||||||||
Sbjct: 111 actcaaaatcccttatattatgggacgga 139
>42165_osa-MIR818b:mirbase
Length = 113
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttg 44
|||||||||||||||||||||||||||
Sbjct: 112 ctccgtcccataatataagggattttg 86
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagg 247
||||||| ||||||||||||||||||||
Sbjct: 86 caaaatcccttatattatgggacggagg 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 221 aaaatcacttatattatgggacggagg 247
|||||| ||||||||||||||||||||
Sbjct: 27 aaaatctcttatattatgggacggagg 1
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggatttt 43
||||||||||||||||||| ||||||
Sbjct: 2 ctccgtcccataatataagagatttt 27
>42166_osa-MIR818c:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttg 44
||||||||||||||||||||||||||
Sbjct: 164 tccgtcccataatataagggattttg 139
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacgga 245
||||||| ||||||||||||||||||
Sbjct: 139 caaaatcccttatattatgggacgga 164
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 cgtcccataatataagggattttga 45
||||| |||||||||||||||||||
Sbjct: 16 cgtcctataatataagggattttga 40
>42653_tae-MIR1120:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||||||||||
Sbjct: 42 cttatattatgggacggagggagta 18
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataag 36
||||| |||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataag 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagta 252
||||||||||| |||||||||||||
Sbjct: 75 cttatattatgagacggagggagta 99
>42110_osa-MIR806a:mirbase
Length = 252
Score = 50.1 bits (25), Expect = 9e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 gtgtttgaccactcgtcttattcaaataattta 91
||||||||||| |||||||||||||| ||||||
Sbjct: 56 gtgtttgaccattcgtcttattcaaaaaattta 88
>42112_osa-MIR806c:mirbase
Length = 270
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 209 tgtttgaccattcgtcttattcaaaaaattt 179
>42368_osa-MIR2123b:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtgtttgaccactcgtcttattcaaa 84
||||||||||| ||||||||||||||
Sbjct: 158 gtgtttgaccattcgtcttattcaaa 133
>42367_osa-MIR2123a:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtgtttgaccactcgtcttattcaaa 84
||||||||||| ||||||||||||||
Sbjct: 26 gtgtttgaccattcgtcttattcaaa 51
>42225_osa-MIR1442:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggat 40
||||||||||||||||||||||
Sbjct: 124 tccgtcccataatataagggat 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||| ||||||
Sbjct: 141 cttatattatgggacggatggagta 117
>42219_osa-MIR1436:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 231 atattatgggacggagggagta 252
||||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagta 12
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 233 attatgggacggagggagta 252
||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142