miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42168_osa-MIR818e:mirbase
          Length = 225

 Score = 77.8 bits (39), Expect = 4e-15
 Identities = 74/83 (89%), Gaps = 2/83 (2%)
 Strand = Plus / Minus

                                                                       
Query: 19  ctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtct 77
           |||||||||||||||||||||||||| || ||||| |||| | ||||||||||||||| |
Sbjct: 224 ctccgtcccataatataagggattttaagtttttgtttgt-attgtttgaccactcgttt 166

                                  
Query: 78  tattcaaataatttatgcaaata 100
           |||||||| ||||| | ||||||
Sbjct: 165 tattcaaaaaatttgtacaaata 143



 Score = 73.8 bits (37), Expect = 6e-14
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                       
Query: 185 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 244
           |||||||||||||||||||| ||  ||| |||||||||||||| |||||||||| |||||
Sbjct: 63  aataagacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatattataggacg 4

            
Query: 245 g 245
           |
Sbjct: 3   g 3



 Score = 69.9 bits (35), Expect = 9e-13
 Identities = 61/67 (91%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                      
Query: 21 ccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtctta 79
          |||||| |||||||||||||||||||| |||||||||  | |||||||||||||||||||
Sbjct: 3  ccgtcctataatataagggattttgagtttttgcttg-cactgtttgaccactcgtctta 61

                 
Query: 80 ttcaaat 86
          || ||||
Sbjct: 62 tttaaat 68



 Score = 63.9 bits (32), Expect = 6e-11
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 185 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 244
           ||||| ||||||||||||||  || ||  ||||||| |||||| ||||||||||||||||
Sbjct: 162 aataaaacgagtggtcaaacaatacaaacaaaaacttaaaatcccttatattatgggacg 221

               
Query: 245 gagg 248
           ||||
Sbjct: 222 gagg 225




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 12 ttactctctccgtcccataatataagggatttt 44
          ||||||||||| |||||||||||||||||||||
Sbjct: 14 ttactctctccatcccataatataagggatttt 46



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 13  tactctctccgtcccataatataagggatttt 44
           ||||| ||||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataagggatttt 96



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 222 aaaatcacttatattatgggacggagggagta 253
           |||||| |||||||||||||||||||||||||
Sbjct: 96  aaaatcccttatattatgggacggagggagta 127



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 222 aaaatcacttatattatgggacggagggagtaa 254
           |||||| |||||||||||||| |||| ||||||
Sbjct: 46  aaaatcccttatattatgggatggagagagtaa 14




>42164_osa-MIR818a:mirbase
          Length = 144

 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 20  tccgtcccataatataagggattttgagt 48
           |||||||||||||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggattttgagt 111



 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 218 actcaaaatcacttatattatgggacgga 246
           |||||||||| ||||||||||||||||||
Sbjct: 111 actcaaaatcccttatattatgggacgga 139




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 19  ctccgtcccataatataagggattttg 45
           |||||||||||||||||||||||||||
Sbjct: 112 ctccgtcccataatataagggattttg 86



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 221 caaaatcacttatattatgggacggagg 248
           ||||||| ||||||||||||||||||||
Sbjct: 86  caaaatcccttatattatgggacggagg 113



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 222 aaaatcacttatattatgggacggagg 248
           |||||| ||||||||||||||||||||
Sbjct: 27  aaaatctcttatattatgggacggagg 1



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 19 ctccgtcccataatataagggatttt 44
          ||||||||||||||||||| ||||||
Sbjct: 2  ctccgtcccataatataagagatttt 27




>42166_osa-MIR818c:mirbase
          Length = 176

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 20  tccgtcccataatataagggattttg 45
           ||||||||||||||||||||||||||
Sbjct: 164 tccgtcccataatataagggattttg 139



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 221 caaaatcacttatattatgggacgga 246
           ||||||| ||||||||||||||||||
Sbjct: 139 caaaatcccttatattatgggacgga 164



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 cgtcccataatataagggattttga 46
          ||||| |||||||||||||||||||
Sbjct: 16 cgtcctataatataagggattttga 40




>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 229 cttatattatgggacggagggagta 253
           |||||||||||||||||||||||||
Sbjct: 42  cttatattatgggacggagggagta 18



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 13 tactctctccgtcccataatataag 37
          ||||| |||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataag 42



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 229 cttatattatgggacggagggagta 253
           ||||||||||| |||||||||||||
Sbjct: 75  cttatattatgagacggagggagta 99




>42110_osa-MIR806a:mirbase
          Length = 252

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 60 gtgtttgaccactcgtcttattcaaataattta 92
          ||||||||||| |||||||||||||| ||||||
Sbjct: 56 gtgtttgaccattcgtcttattcaaaaaattta 88




>42112_osa-MIR806c:mirbase
          Length = 270

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 61  tgtttgaccactcgtcttattcaaataattt 91
           |||||||||| |||||||||||||| |||||
Sbjct: 209 tgtttgaccattcgtcttattcaaaaaattt 179




>42368_osa-MIR2123b:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 60  gtgtttgaccactcgtcttattcaaa 85
           ||||||||||| ||||||||||||||
Sbjct: 158 gtgtttgaccattcgtcttattcaaa 133




>42367_osa-MIR2123a:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 60 gtgtttgaccactcgtcttattcaaa 85
          ||||||||||| ||||||||||||||
Sbjct: 26 gtgtttgaccattcgtcttattcaaa 51




>42225_osa-MIR1442:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 20  tccgtcccataatataagggat 41
           ||||||||||||||||||||||
Sbjct: 124 tccgtcccataatataagggat 145



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 229 cttatattatgggacggagggagta 253
           |||||||||||||||||| ||||||
Sbjct: 141 cttatattatgggacggatggagta 117




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 232 atattatgggacggagggagta 253
           ||||||||||||||||||||||
Sbjct: 33  atattatgggacggagggagta 12



 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 attatgggacggagggagta 253
           ||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142