miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39031_sma-bantam:mirbase
          Length = 72

 Score =  143 bits (72), Expect = 2e-35
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggcaagtcggcttttattgcgctctgagaaaatttattgtcatctgagatcgcgattaaa 67
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggcaagtcggcttttattgcgctctgagaaaatttattgtcatctgagatcgcgattaaa 60

                      
Query: 68 gctggttttcca 79
          ||||||||||||
Sbjct: 61 gctggttttcca 72




>38953_sja-bantam:mirbase
          Length = 80

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 11 aagtcggcttttattgcgctctgagaaaa 39
          |||||||||||||||||||||||||||||
Sbjct: 1  aagtcggcttttattgcgctctgagaaaa 29



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 49 atctgagatcgcgattaaagctggttt 75
          |||||||||||||||||||||||||||
Sbjct: 54 atctgagatcgcgattaaagctggttt 80