miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 61
|||||||||||||||||||||||||||| |||| | || ||||||||| ||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 62 ccc 64
|||
Sbjct: 66 ccc 68
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 95 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 154
|||||||||||||| |||||| ||||||| | | | | ||||||| |||||||||||
Sbjct: 106 ttgtggcttgcatatctcaggagcttcattaccttgtattagatccttgtttggattgaa 165
Query: 155 gggagctct 163
|||||||||
Sbjct: 166 gggagctct 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 61
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 62 ccc 64
|||
Sbjct: 71 ccc 73
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 95 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 154
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 155 gggagctct 163
|||||||||
Sbjct: 171 gggagctct 179
>41528_sly-MIR159:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 135 tgatccttttttggattgaagggagctct 163
||||| |||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctct 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||| ||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
|||| |||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctct 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaataga 23
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||| ||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctct 173
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 137 atccttttttggattgaagggagctct 163
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 137 atccttttttggattgaagggagctct 163
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 139 ccttttttggattgaagggagctct 163
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>40397_ahy-MIR159:mirbase
Length = 197
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||||| ||||||||||||||||||||
Sbjct: 149 gatccttatttggattgaagggagctct 176
Score = 46.1 bits (23), Expect = 8e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 61
|||||||||||||||||| ||||| ||| ||||| | || |||||||| ||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 62 ccc 64
|||
Sbjct: 65 ccc 67
>41218_csi-MIR159:mirbase
Length = 216
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 141 ttttttggattgaagggagctct 163
|||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctct 205
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
