miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 62
|||||||||||||||||||||||||||| |||| | || ||||||||| ||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 63 ccc 65
|||
Sbjct: 66 ccc 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 96 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 155
|||||||||||||| |||||| ||||||| | | | | ||||||| |||||||||||
Sbjct: 106 ttgtggcttgcatatctcaggagcttcattaccttgtattagatccttgtttggattgaa 165
Query: 156 gggagctcta 165
||||||||||
Sbjct: 166 gggagctcta 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 62
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 63 ccc 65
|||
Sbjct: 71 ccc 73
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 96 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 155
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 156 gggagctcta 165
||||||||||
Sbjct: 171 gggagctcta 180
>41528_sly-MIR159:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 tgatccttttttggattgaagggagctcta 165
||||| ||||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
|||| ||||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctcta 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaataga 24
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>40397_ahy-MIR159:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||||| |||||||||||||||||||||
Sbjct: 149 gatccttatttggattgaagggagctcta 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 62
|||||||||||||||||| ||||| ||| ||||| | || |||||||| ||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 63 ccc 65
|||
Sbjct: 65 ccc 67
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 142 ttttttggattgaagggagctcta 165
||||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctcta 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 138 atccttttttggattgaagggagctcta 165
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 138 atccttttttggattgaagggagctcta 165
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 140 ccttttttggattgaagggagctcta 165
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
