miRNEST 2.0, an integrative microRNA resource :: BLAST
>40363_rco-MIR171e:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctccc-aagaattgggtcctttagtttgatt 59
|||||||||| ||||||||||||||||||||||| ||| |||||||||||| | |||||
Sbjct: 4 gatgttggaatggctcaatcaaatcaaatctcccaaagttttgggtcctttaatctgatt 63
Query: 60 gagccgtgccaatatc 75
||||||||||||||||
Sbjct: 64 gagccgtgccaatatc 79
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 91.7 bits (46), Expect = 6e-20
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgat 58
|||||||||| ||||||||||||||||||||||||| | |||||||||||| | ||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
Query: 59 tgagccgtgccaatatc 75
|||||||||||||||||
Sbjct: 73 tgagccgtgccaatatc 89
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 81.8 bits (41), Expect = 6e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 3 tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 62
|||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 63 ccgtgccaatatc 75
|||||||||||||
Sbjct: 63 ccgtgccaatatc 75
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 75.8 bits (38), Expect = 4e-15
Identities = 69/79 (87%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaagaat----tgggtcctttagtttg 56
|||||||||| |||||||||||||||||||||||||| | ||||| |||| ||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaatttg 78
Query: 57 attgagccgtgccaatatc 75
|||||||||||||||||||
Sbjct: 79 attgagccgtgccaatatc 97
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattg 60
|||||||| |||||||||||||| |||| || ||| ||| |||||||| | ||||||
Sbjct: 14 gatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgattg 73
Query: 61 agccgtgccaatatc 75
|||||||||||||||
Sbjct: 74 agccgtgccaatatc 88
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 gtcctttagtttgattgagccgtgccaatatc 75
|||||||||| |||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatc 95
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 68/81 (83%), Gaps = 6/81 (7%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaa-----ga-attgggtcctttagtt 54
|||||||| | |||||||||| |||||||||||||| || ||||||| |||| |
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgtttaatc 70
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatc 142
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 40 ttgggtcctttagtttgattgagccgtgccaatatc 75
||||||| |||| | |||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatc 91
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatc 92
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40360_rco-MIR171b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatc 83
>40318_bra-MIR171a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>40289_bna-MIR171e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>39851_aly-MIR171c:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 71 gtttgattgagccgtgccaatatc 94
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 ttggaacggctcaatcaaatcaaa 28
|||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 13 gctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgagccgtgccaat 72
|||||||||||||||| | | ||| |||||| |||| | ||||||||||||||||||
Sbjct: 23 gctcaatcaaatcaaagcactcaatggttgggttctttcatctgattgagccgtgccaat 82
Query: 73 atc 75
|||
Sbjct: 83 atc 85
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatc 181
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatc 97
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>40457_gma-MIR171c:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatc 92
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>40062_ath-MIR171c:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatat 74
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>42770_zma-MIR171j:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatc 115
>40695_mtr-MIR171:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 47 ctttagtttgattgagccgtgccaatatc 75
||||||| |||||||| ||||||||||||
Sbjct: 67 ctttagtctgattgagtcgtgccaatatc 95
>40361_rco-MIR171c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
