miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41188_aqc-MIR396a:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 62  ctttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||||
Sbjct: 95  ctttgcggttcaataaagctgtggga 120



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  ttccacggctttcttgaactgcatgg 26
          |||||| |||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcatgg 26




>40727_mtr-MIR396b:mirbase
          Length = 95

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 63 tttgcggttcaataaagctgtggga 87
          |||||||||||||||||||||||||
Sbjct: 66 tttgcggttcaataaagctgtggga 90



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 6  ttccacagctttcttgaactgcat 29




>40646_lja-MIR396:mirbase
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 63 tttgcggttcaataaagctgtggga 87
          |||||||||||||||||||||||||
Sbjct: 70 tttgcggttcaataaagctgtggga 94



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgcat 39




>40473_gma-MIR396a:mirbase
          Length = 140

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 63  tttgcggttcaataaagctgtggga 87
           |||||||||||||||||||||||||
Sbjct: 97  tttgcggttcaataaagctgtggga 121



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44




>40085_ath-MIR396a:mirbase
          Length = 151

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 63  tttgcggttcaataaagctgtggga 87
           |||||||||||||||||||||||||
Sbjct: 117 tttgcggttcaataaagctgtggga 141



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>39877_aly-MIR396a:mirbase
          Length = 172

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 63  tttgcggttcaataaagctgtggga 87
           |||||||||||||||||||||||||
Sbjct: 127 tttgcggttcaataaagctgtggga 151



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgca 46




>41663_vvi-MIR396d:mirbase
          Length = 120

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||
Sbjct: 85  ttgcggttcaataaagctgtggga 108



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34




>41435_ptc-MIR396a:mirbase
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||
Sbjct: 92  ttgcggttcaataaagctgtggga 115



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41242_csi-MIR396b:mirbase
          Length = 134

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||
Sbjct: 82  ttgcggttcaataaagctgtggga 105



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgcat 43




>41058_ghr-MIR396b:mirbase
          Length = 135

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||
Sbjct: 102 ttgcggttcaataaagctgtggga 125



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41057_ghr-MIR396a:mirbase
          Length = 136

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           ||||||||||||||||||||||||
Sbjct: 102 ttgcggttcaataaagctgtggga 125



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41436_ptc-MIR396b:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  tgcggttcaataaagctgtggga 87
           |||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtggga 124



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>42807_zma-MIR396a:mirbase
          Length = 137

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  ttccacggctttcttgaactgcatg 25
          |||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 100 gttcaataaagctgtggga 118




>42582_sbi-MIR396a:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  ttccacggctttcttgaactgcatg 25
          |||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 88  gttcaataaagctgtggga 106




>41440_ptc-MIR396f:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacggctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaactg 31




>42814_zma-MIR396h:mirbase
          Length = 124

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgcat 75



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 69 gttcaataaagctgtggga 87
          |||||||||||||||||||
Sbjct: 20 gttcaataaagctgtggga 2




>42813_zma-MIR396g:mirbase
          Length = 114

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   ttccacggctttcttgaactgcat 24
           |||||| |||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcat 88



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 69 gttcaataaagctgtggga 87
          |||||||||||||||||||
Sbjct: 20 gttcaataaagctgtggga 2




>42808_zma-MIR396b:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 99  gttcaataaagctgtggga 117




>42583_sbi-MIR396b:mirbase
          Length = 128

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 91  gttcaataaagctgtggga 109




>42472_ssp-MIR396:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcat 24



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 69 gttcaataaagctgtggga 87
          |||||||||||||||||||
Sbjct: 77 gttcaataaagctgtggga 95




>42461_sof-MIR396:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 97  gttcaataaagctgtggga 115




>42027_osa-MIR396b:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 88  gttcaataaagctgtggga 106




>41794_bdi-MIR396d:mirbase
          Length = 152

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacggctttcttgaactgcat 24
          |||||| |||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcat 56



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 101 gttcaataaagctgtggga 119




>41441_ptc-MIR396g:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacggctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaact 30




>41437_ptc-MIR396c:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  ttccacggctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 94 ttccacggctttcttgaact 75




>41142_tcc-MIR396e:mirbase
          Length = 146

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttccacggctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 124 ttccacggctttcttgaact 105




>41141_tcc-MIR396d:mirbase
          Length = 182

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacggctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacggctttcttgaact 40




>41139_tcc-MIR396b:mirbase
          Length = 151

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 64  ttgcggttcaataaagctgtggga 87
           |||| |||||||||||||||||||
Sbjct: 108 ttgcagttcaataaagctgtggga 131




>39381_pab-MIR396c:mirbase
          Length = 143

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacggctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 25 ttccacggctttcttgaact 44




>39380_pab-MIR396b:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacggctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 9  ttccacggctttcttgaact 28




>42026_osa-MIR396a:mirbase
          Length = 154

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacggctttcttgaactgca 23
          |||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 126 gttcaataaagctgtggga 144




>41793_bdi-MIR396c:mirbase
          Length = 153

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gttcaataaagctgtggga 87
           |||||||||||||||||||
Sbjct: 102 gttcaataaagctgtggga 120




>39741_smo-MIR396:mirbase
          Length = 168

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  ttccacggctttcttgaac 19
          |||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaac 29