miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 tgctttttgattgagccgtgccaatatcac 84
          ||||||||||||||||||||||||||||||
Sbjct: 57 tgctttttgattgagccgtgccaatatcac 86




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 56  gctttttgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||||||||
Sbjct: 155 gctttttgattgagccgtgccaatatcac 183




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 58 tttttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||||
Sbjct: 66 tttttgattgagccgtgccaatatcac 92




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 59 ttttgattgagccgtgccaatatcac 84
          ||||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatcac 92




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 60  tttgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcac 91




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcac 93




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94




>41231_csi-MIR171a:mirbase
          Length = 97

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 56 gctttttgattgagccgtgccaatatcac 84
          ||||||||||||||||| |||||||||||
Sbjct: 61 gctttttgattgagccgcgccaatatcac 89




>41211_ccl-MIR171:mirbase
          Length = 321

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 56  gctttttgattgagccgtgccaatatcac 84
           ||||||||||||||||| |||||||||||
Sbjct: 116 gctttttgattgagccgcgccaatatcac 144




>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcac 85




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 60  tttgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatcac 109




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tttgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatcac 96




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 ttgattgagccgtgccaatatcac 84
          ||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 61  ttgattgagccgtgccaatatcac 84
           ||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137




>41540_sly-MIR171c:mirbase
          Length = 121

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 57  ctttttgattgagccgtgccaatatcac 84
           |||||||||||||||| |||||||||||
Sbjct: 73  ctttttgattgagccgcgccaatatcac 100




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 59  ttttgattgagccgtgccaatatc 82
           ||||||||||||||||||||||||
Sbjct: 81  ttttgattgagccgtgccaatatc 104




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 59  ttttgattgagccgtgccaatatc 82
           ||||||||||||||||||||||||
Sbjct: 118 ttttgattgagccgtgccaatatc 141




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 59  ttttgattgagccgtgccaatatc 82
           ||||||||||||||||||||||||
Sbjct: 83  ttttgattgagccgtgccaatatc 106




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatcac 112




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatcac 115




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tgattgagccgtgccaatatcac 84
           |||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatcac 119




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatc 107




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 tgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 tgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 60 tttgattgagccgtgccaatatc 82
          |||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 tgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 tgattgagccgtgccaatatcac 84
          |||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40697_mtr-MIR171c:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 ttttgattgagccgtgccaatat 81
          |||||||||||||||||||||||
Sbjct: 77 ttttgattgagccgtgccaatat 99




>40454_gma-MIR171a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 58 tttttgattgagccgtgccaatatcac 84
          ||||| |||||||||||||||||||||
Sbjct: 64 tttttcattgagccgtgccaatatcac 90




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 60  tttgattgagccgtgccaatatc 82
           |||||||||||||||||||||||
Sbjct: 97  tttgattgagccgtgccaatatc 119




>42641_tae-MIR171b:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  gattgagccgtgccaatatcac 84
           ||||||||||||||||||||||
Sbjct: 90  gattgagccgtgccaatatcac 111




>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 tgattgagccgtgccaatatca 83
          ||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 tgattgagccgtgccaatatca 83
          ||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89




>40321_bra-MIR171d:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92




>40320_bra-MIR171c:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86




>40319_bra-MIR171b:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93




>40287_bna-MIR171c:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86




>40286_bna-MIR171b:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92




>40285_bna-MIR171a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93




>40061_ath-MIR171b:mirbase
          Length = 117

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 gattgagccgtgccaatatcac 84
          ||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97




>39850_aly-MIR171b:mirbase
          Length = 137

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  gattgagccgtgccaatatcac 84
           ||||||||||||||||||||||
Sbjct: 87  gattgagccgtgccaatatcac 108




>39736_smo-MIR171a:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  gattgagccgtgccaatatcac 84
           ||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124