miRNEST 2.0, an integrative microRNA resource :: BLAST
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 6e-14
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 1 gatgttggcgtggctcaatcaaatcaaacttctcaactgtttattgggtcctttaatttg 60
|||||||| |||||||||||||||||| || ||| ||| |||||||||||||| ||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggtt--ttgggtcctttaatctg 70
Query: 61 attgagccgtgccaatatc 79
|||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatc 89
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 43 attgggtcctttaatttgattgagccgtgccaatatc 79
||||||||||||||| |||||||||||||||||||||
Sbjct: 39 attgggtcctttaatctgattgagccgtgccaatatc 75
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 63.9 bits (32), Expect = 2e-11
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1 gatgttggcgtggctcaatcaaatcaaacttctcaa-ctgtttattgggtcctttaattt 59
|||||||| |||||||||||||||||| || ||| || ||||| |||| ||||||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttat-gggtgttttaattt 77
Query: 60 gattgagccgtgccaatatc 79
||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatc 97
>40363_rco-MIR171e:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 44 ttgggtcctttaatttgattgagccgtgccaatatc 79
|||||||||||||| |||||||||||||||||||||
Sbjct: 44 ttgggtcctttaatctgattgagccgtgccaatatc 79
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 gtcctttaatttgattgagccgtgccaatatc 79
|||||||||| |||||||||||||||||||||
Sbjct: 57 gtcctttaatctgattgagccgtgccaatatc 88
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 ttgggtcctttaatttgattgagccgtgccaatatc 79
||||||| |||||| |||||||||||||||||||||
Sbjct: 56 ttgggtcgtttaatctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 ttgggtcctttaatttgattgagccgtgccaatatc 79
||||||| |||||| |||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatc 91
>40361_rco-MIR171c:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 ctttaatttgattgagccgtgccaatatc 79
||||||| |||||||||||||||||||||
Sbjct: 54 ctttaatctgattgagccgtgccaatatc 82
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 atttgattgagccgtgccaatatc 79
||||||||||||||||||||||||
Sbjct: 97 atttgattgagccgtgccaatatc 120
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 ttgggtcctttaatttgattgagccgtgccaatatc 79
|||||| |||| || |||||||||||||||||||||
Sbjct: 50 ttgggttctttcatctgattgagccgtgccaatatc 85
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 gtcctttaatttgattgagccgtgccaatatc 79
|||||||| | |||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatc 95
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 atttgattgagccgtgccaatatc 79
||||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatc 97
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 atttgattgagccgtgccaatatc 79
||||||||||||||||||||||||
Sbjct: 64 atttgattgagccgtgccaatatc 87
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 atttgattgagccgtgccaatatc 79
||||||||||||||||||||||||
Sbjct: 69 atttgattgagccgtgccaatatc 92
>40062_ath-MIR171c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 atttgattgagccgtgccaatatc 79
||||||||||||||||||||||||
Sbjct: 84 atttgattgagccgtgccaatatc 107
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatc 142
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatc 92
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatc 181
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatc 83
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatc 88
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatc 88
>39851_aly-MIR171c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatatc 79
|||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatc 94
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 ttgattgagccgtgccaatatc 79
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 ttgattgagccgtgccaatatc 79
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 tttgattgagccgtgccaatat 78
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>42770_zma-MIR171j:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgccaatatc 79
|||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatc 115
>40695_mtr-MIR171:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 gatgttggcgtggctcaatcaaatcaaacttct 33
||||||||| || ||||||||||||||| ||||
Sbjct: 21 gatgttggcttgtctcaatcaaatcaaagttct 53
