miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41463_ptc-MIR408:mirbase
          Length = 105

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 62 ttgttgtggctctactcatgcactgcctcttccctggc 99
          ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 59 ttgttttggctctacccatgcactgcctcttccctggc 96



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 aggcagagcatggatggagcta 31
          ||||||||||||||||||||||
Sbjct: 24 aggcagagcatggatggagcta 45




>41683_vvi-MIR408:mirbase
          Length = 107

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 70 gctctactcatgcactgcctcttccctggc 99
          ||||||| ||||||||||||||||||||||
Sbjct: 68 gctctacccatgcactgcctcttccctggc 97




>40391_rco-MIR408:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
          |||| ||||||||| | ||||||||||||||||||||
Sbjct: 51 tgttttggctctacccctgcactgcctcttccctggc 87




>40108_ath-MIR408:mirbase
          Length = 218

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 71  ctctactcatgcactgcctcttccctggc 99
           |||||| ||||||||||||||||||||||
Sbjct: 112 ctctacccatgcactgcctcttccctggc 140




>39897_aly-MIR408:mirbase
          Length = 211

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 71  ctctactcatgcactgcctcttccctggc 99
           |||||| ||||||||||||||||||||||
Sbjct: 109 ctctacccatgcactgcctcttccctggc 137




>40405_ahy-MIR408:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 76  ctcatgcactgcctcttccctggc 99
           ||||||||||||||||||||||||
Sbjct: 78  ctcatgcactgcctcttccctggc 101




>40404_ahy-MIR408:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 76  ctcatgcactgcctcttccctggc 99
           ||||||||||||||||||||||||
Sbjct: 78  ctcatgcactgcctcttccctggc 101




>39490_ppt-MIR408b:mirbase
          Length = 144

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 76  ctcatgcactgcctcttccctggc 99
           ||||||||||||||||||||||||
Sbjct: 90  ctcatgcactgcctcttccctggc 113




>41252_csi-MIR408:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 78  catgcactgcctcttccctggc 99
           ||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggc 140




>41193_aqc-MIR408:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 78 catgcactgcctcttccctggc 99
          ||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggc 2




>39742_smo-MIR408:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 79 atgcactgcctcttccctggc 99
          |||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggc 96




>39428_pta-MIR408:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 79 atgcactgcctcttccctggc 99
          |||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggc 84




>42830_zma-MIR408b:mirbase
          Length = 147

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggc 145




>42829_zma-MIR408:mirbase
          Length = 191

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggc 172




>42647_tae-MIR408:mirbase
          Length = 187

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggc 156




>42600_sbi-MIR408:mirbase
          Length = 205

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggc 204




>42474_ssp-MIR408d:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggc 178




>42473_ssp-MIR408a:mirbase
          Length = 248

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggc 246




>42465_sof-MIR408d:mirbase
          Length = 215

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggc 196




>42464_sof-MIR408c:mirbase
          Length = 286

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267




>42463_sof-MIR408b:mirbase
          Length = 286

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267




>42462_sof-MIR408a:mirbase
          Length = 283

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggc 264




>42052_osa-MIR408:mirbase
          Length = 213

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tgcactgcctcttccctggc 99
           ||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggc 173