miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41163_aqc-MIR156b:mirbase
          Length = 83

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 55 tcactccttcgtgctctctatgcttctgtca 85
          ||||||||| |||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctgtca 81



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagatagagagcacaga 23




>40652_mtr-MIR156e:mirbase
          Length = 172

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 55  tcactccttcgtgctctctatgcttctgtca 85
           ||||||||| |||||||||||||||||||||
Sbjct: 137 tcactcctttgtgctctctatgcttctgtca 167



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcacaga 29




>40337_rco-MIR156h:mirbase
          Length = 97

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 55 tcactccttcgtgctctctatgcttctgtca 85
          ||||||||| |||||||||||||||||||||
Sbjct: 59 tcactcctttgtgctctctatgcttctgtca 89



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcacaga 29




>41297_ptc-MIR156j:mirbase
          Length = 100

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 56 cactccttcgtgctctctatgcttctgtca 85
          |||||||| |||||||||||||||||||||
Sbjct: 62 cactcctttgtgctctctatgcttctgtca 91



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>41077_gra-MIR157b:mirbase
          Length = 91

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 56 cactccttcgtgctctctatgcttctgtca 85
          |||||||| |||||||||||||||||||||
Sbjct: 57 cactcctttgtgctctctatgcttctgtca 86



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 5  ttgacagaagatagagagcacaga 28




>41084_tcc-MIR156e:mirbase
          Length = 123

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 49  tgcaattcactccttcgtgctctctatgcttctgtca 85
           |||| |||||||||| ||||||||||| |||||||||
Sbjct: 64  tgcatttcactcctttgtgctctctattcttctgtca 100



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcacaga 44




>41569_vvi-MIR156i:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 55 tcactccttcgtgctctctatgcttctgtca 85
          ||||||||| ||||||||||| |||||||||
Sbjct: 60 tcactcctttgtgctctctattcttctgtca 90




>41567_vvi-MIR156g:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>41296_ptc-MIR156i:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 55 tcactccttcgtgctctctatgcttctg 82
          ||||||||| ||||||||||||||||||
Sbjct: 61 tcactcctttgtgctctctatgcttctg 88




>41294_ptc-MIR156g:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>41076_gra-MIR157a:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 5  ttgacagaagatagagagcacaga 28



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 56 cactccttcgtgctctctatgcttctgtca 85
          |||||||| ||||||| |||||||||||||
Sbjct: 67 cactcctttgtgctctttatgcttctgtca 96




>40655_mtr-MIR156h:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcacaga 29




>40428_gma-MIR156d:mirbase
          Length = 151

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcacaga 44



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 57  actccttcgtgctctctatgcttctgtca 85
           ||||||| ||||||||||| |||||||||
Sbjct: 103 actcctttgtgctctctatacttctgtca 131




>40011_ath-MIR157b:mirbase
          Length = 132

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcacaga 42




>40010_ath-MIR157a:mirbase
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 4  ttgacagaagatagagagcacaga 27




>39799_aly-MIR157b:mirbase
          Length = 97

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 4  ttgacagaagatagagagcacaga 27




>39798_aly-MIR157a:mirbase
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 16 ttgacagaagatagagagcacaga 39




>41162_aqc-MIR156a:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagatagagagcacaga 23



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 65 gtgctctctatgcttctgtca 85
          |||||||||||||||||||||
Sbjct: 59 gtgctctctatgcttctgtca 79




>40431_gma-MIR156g:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          |||||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcacag 46



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   ttgacagaagatagagagcaca 22
           ||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcaca 86




>39727_smo-MIR156b:mirbase
          Length = 112

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 62  ttcgtgctctctatgcttctgtca 85
           |||||||||||||| |||||||||
Sbjct: 77  ttcgtgctctctattcttctgtca 100




>41566_vvi-MIR156f:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcaca 32




>41085_tcc-MIR156f:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcaca 42




>40653_mtr-MIR156f:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcaca 27




>40427_gma-MIR156c:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 1   ttgacagaagatagagagcaca 22
           ||||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcaca 167




>40395_ahy-MIR156b:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 23 ttgacagaagatagagagcaca 44




>40394_ahy-MIR156b:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 23 ttgacagaagatagagagcaca 44




>40335_rco-MIR156f:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcaca 27




>41527_sly-MIR156c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>41526_sly-MIR156b:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>41525_sly-MIR156a:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 65 gtgctctctatgcttctgtca 85
          |||||||||||||||||||||
Sbjct: 79 gtgctctctatgcttctgtca 99




>41295_ptc-MIR156h:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31




>40429_gma-MIR156e:mirbase
          Length = 124

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41




>40336_rco-MIR156g:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcac 26




>40310_bra-MIR157a:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 14 ttgacagaagatagagagcac 34



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 57  actccttcgtgctctctatgcttctgtca 85
           |||| |||||||||||||| |||||||||
Sbjct: 111 actctttcgtgctctctatacttctgtca 139




>40304_bol-MIR157a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcac 26




>40260_bna-MIR156c:mirbase
          Length = 155

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcac 38




>40259_bna-MIR156b:mirbase
          Length = 208

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 25 ttgacagaagatagagagcac 45



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 57  actccttcgtgctctctatgcttctgtca 85
           |||| |||||||||||||| |||||||||
Sbjct: 150 actctttcgtgctctctatacttctgtca 178




>40013_ath-MIR157d:mirbase
          Length = 221

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  gtgctctctatgcttctgtca 85
           |||||||||||||||||||||
Sbjct: 173 gtgctctctatgcttctgtca 193



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  tgacagaagatagagagcac 21
          ||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43




>40012_ath-MIR157c:mirbase
          Length = 217

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44




>39801_aly-MIR157d:mirbase
          Length = 256

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  gtgctctctatgcttctgtca 85
           |||||||||||||||||||||
Sbjct: 191 gtgctctctatgcttctgtca 211



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  tgacagaagatagagagcac 21
          ||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57




>39800_aly-MIR157c:mirbase
          Length = 293

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 55 ttgacagaagatagagagcac 75




>39416_pta-MIR156b:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  tgacagaagatagagagcaca 22
          |||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcaca 23




>39415_pta-MIR156a:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  tgacagaagatagagagcaca 22
          |||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcaca 23




>41877_far-MIR529:mirbase
          Length = 120

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          ||||||||||| |||||||||||
Sbjct: 47 ttgacagaagagagagagcacag 69




>41867_far-MIR156b:mirbase
          Length = 180

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          ||||||||||| |||||||||||
Sbjct: 53 ttgacagaagagagagagcacag 75




>41866_far-MIR156a:mirbase
          Length = 180

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          ||||||||||| |||||||||||
Sbjct: 53 ttgacagaagagagagagcacag 75




>41726_bdi-MIR156:mirbase
          Length = 147

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 1   ttgacagaagatagagagcacag 23
           ||||||||||| |||||||||||
Sbjct: 100 ttgacagaagagagagagcacag 122