miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  gagctccttgaagtccaatagaggatctgagtgggaagatagtgctgctggcttatggat 60
          |||||||||||||||||||||||| ||| | |||| |||| | ||||||| |||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70




>40338_rco-MIR159:mirbase
          Length = 180

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  gagctccttgaagtccaatagaggatct 28
          ||||||||||||||||||||||||||||
Sbjct: 6  gagctccttgaagtccaatagaggatct 33



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 43/48 (89%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                           
Query: 83  ttttgtataggctttgtggcttgcataacccaggagctttattacctt 130
           ||||| |||||||| |||||||||||| | ||||||||| ||||||||
Sbjct: 94  ttttggataggctt-gtggcttgcatatctcaggagcttcattacctt 140




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gagctccttgaagtccaatagagg 24
          ||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gagctccttgaagtccaatagagg 24
          ||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  gagctccttgaagtccaatagaggatct 28
          ||||||||||||||||||| ||||||||
Sbjct: 4  gagctccttgaagtccaattgaggatct 31




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  gagctccttgaagtccaatagaggatct 28
          ||||||||||||||||||| ||||||||
Sbjct: 4  gagctccttgaagtccaattgaggatct 31




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  gagctccttgaagtccaatagaggatct 28
          ||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  gagctccttgaagtccaataga 22
          ||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 100 ggcttgcataacccaggagctttattacct 129
           |||||||||| | |||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacct 142




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                           
Query: 1  gagctccttgaagtccaatagaggatctgagtgggaagatagtgctgct 49
          |||||||||||||||||| ||||| |||  ||||| |||| | ||||||
Sbjct: 5  gagctccttgaagtccaacagagggtcttggtgggtagattgagctgct 53




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  gagctccttgaagtccaatagagg 24
          |||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37