miRNEST 2.0, an integrative microRNA resource :: BLAST
>40363_rco-MIR171e:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctccc-aagaattgggtcctttagtttgatt 60
|||||||||| ||||||||||||||||||||||| ||| |||||||||||| | |||||
Sbjct: 4 gatgttggaatggctcaatcaaatcaaatctcccaaagttttgggtcctttaatctgatt 63
Query: 61 gagccgtgccaatatc 76
||||||||||||||||
Sbjct: 64 gagccgtgccaatatc 79
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgat 59
|||||||||| ||||||||||||||||||||||||| | |||||||||||| | ||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
Query: 60 tgagccgtgccaatatca 77
||||||||||||||||||
Sbjct: 73 tgagccgtgccaatatca 90
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 4 tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 63
|||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 64 ccgtgccaatatca 77
||||||||||||||
Sbjct: 63 ccgtgccaatatca 76
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 77.8 bits (39), Expect = 1e-15
Identities = 70/80 (87%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctcccaagaat----tgggtcctttagtttg 57
|||||||||| |||||||||||||||||||||||||| | ||||| |||| ||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaatttg 78
Query: 58 attgagccgtgccaatatca 77
||||||||||||||||||||
Sbjct: 79 attgagccgtgccaatatca 98
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 65.9 bits (33), Expect = 4e-12
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1 tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 60
||||||||| |||||||||||||| |||| || ||| ||| |||||||| | |||||
Sbjct: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
Query: 61 gagccgtgccaatatca 77
|||||||||||||||||
Sbjct: 73 gagccgtgccaatatca 89
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 45 gtcctttagtttgattgagccgtgccaatatca 77
|||||||||| ||||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatca 96
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 69/82 (84%), Gaps = 6/82 (7%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctcccaa-----gaa-ttgggtcctttagtt 55
|||||||| | |||||||||| |||||||||||||| || ||||||| |||| |
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgtttaatc 70
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 41 ttgggtcctttagtttgattgagccgtgccaatatca 77
||||||| |||| | ||||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatca 92
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatca 93
>40360_rco-MIR171b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatca 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 71 gtttgattgagccgtgccaatatca 95
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 9e-07
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 60
||||||||| | |||||||||||||||| | | ||| |||||| |||| | |||||
Sbjct: 10 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 69
Query: 61 gagccgtgccaatatc 76
||||||||||||||||
Sbjct: 70 gagccgtgccaatatc 85
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>40062_ath-MIR171c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatca 108
>42769_zma-MIR171i:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatca 77
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatca 77
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 6 ttggaacggctcaatcaaatcaaa 29
|||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatat 75
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40695_mtr-MIR171:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 48 ctttagtttgattgagccgtgccaatatca 77
||||||| |||||||| |||||||||||||
Sbjct: 67 ctttagtctgattgagtcgtgccaatatca 96
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42641_tae-MIR171b:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatca 110
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
