miRNEST 2.0, an integrative microRNA resource :: BLAST
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacacgtagagacc 33
|||||||||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccacacgtagagacc 43
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 2e-10
Identities = 71/84 (84%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacacgtagagacccatc---tgtttatgatcggctactgc 57
||||||||||||||||||||||| | | ||||| ||| ||||| ||| |||| |||
Sbjct: 11 tgcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattggctgttgc 70
Query: 58 gggtggcgtgcgaggagccaagca 81
|||||||||||||||||||||||
Sbjct: 71 cggtggcgtgcgaggagccaagca 94
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 ctactgcgggtggcgtgcgaggagccaagca 81
||||||||| |||||||||||||||||||||
Sbjct: 70 ctactgcggatggcgtgcgaggagccaagca 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41926_osa-MIR160d:mirbase
Length = 142
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 ctactgcgggtggcgtgcgaggagccaagca 81
||||||||| |||||||||||||||||||||
Sbjct: 107 ctactgcggatggcgtgcgaggagccaagca 137
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 49 ggctactgcgggtggcgtgcgaggagccaagca 81
|||| |||| |||||||||||||||||||||||
Sbjct: 63 ggctgctgccggtggcgtgcgaggagccaagca 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccaca 23
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>40340_rco-MIR160b:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 49 ggctactgcgggtggcgtgcgaggagccaagca 81
||||| ||| |||||||||||||||||||||||
Sbjct: 57 ggctattgccggtggcgtgcgaggagccaagca 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccaca 23
|||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccaca 28
>42707_zma-MIR160g:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccacac 25
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagca 83
>42702_zma-MIR160b:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacac 44
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagca 101
>42701_zma-MIR160a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccacac 33
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>41923_osa-MIR160a:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccacac 27
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagca 85
>41869_far-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacac 76
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccacac 54
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 91 gggtggcgtgcaaggagccaagca 114
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccacac 24
||||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccacac 54
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 89 gggtggcgtgcaaggagccaagca 112
>42636_tae-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctactgcgggtggcgtgcgaggagccaagca 81
|||| |||| |||||||||||||||||||||
Sbjct: 81 ctaccgcggatggcgtgcgaggagccaagca 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctactgcgggtggcgtgcgaggagccaagca 81
|||| |||| |||||||||||||||||||||
Sbjct: 112 ctaccgcggatggcgtgcgaggagccaagca 142
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccac 53
>40020_ath-MIR160b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccaca 23
|||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccaca 23
|||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43
>39374_pab-MIR160a:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccaca 23
|||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccaca 36
>42705_zma-MIR160e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 54 ctgcgggtggcgtgcgaggagccaagca 81
|||||| |||||||||||| ||||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagca 86
>42704_zma-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 53 actgcgggtggcgtgcgaggagccaagca 81
||||||| ||||||||| |||||||||||
Sbjct: 95 actgcggatggcgtgcgtggagccaagca 123
>42703_zma-MIR160c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 54 ctgcgggtggcgtgcgaggagccaagca 81
|||||| |||||||||||| ||||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagca 95
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41925_osa-MIR160c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>41924_osa-MIR160b:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcgaggagccaagca 81
||||||||||| ||||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagca 111
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccac 22
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40658_mtr-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40436_gma-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgtatgccac 22
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
