miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41447_ptc-MIR398c:mirbase
          Length = 97

 Score =  103 bits (52), Expect = 2e-23
 Identities = 71/76 (93%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  aggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgtg 59
          |||||||||||| ||| ||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 12 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgtg 71

                          
Query: 60 ttctcaggtcgcccct 75
          ||||||||||||||||
Sbjct: 72 ttctcaggtcgcccct 87




>41801_bdi-MIR398c:mirbase
          Length = 131

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 54  catgtgttctcaggtcgcccct 75
           ||||||||||||||||||||||
Sbjct: 85  catgtgttctcaggtcgcccct 106




>41799_bdi-MIR398a:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 54  catgtgttctcaggtcgcccct 75
           ||||||||||||||||||||||
Sbjct: 94  catgtgttctcaggtcgcccct 115




>41667_vvi-MIR398c:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 54 catgtgttctcaggtcgcccct 75
          ||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccct 77




>41666_vvi-MIR398b:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 54 catgtgttctcaggtcgcccct 75
          ||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccct 77




>41446_ptc-MIR398b:mirbase
          Length = 85

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 54 catgtgttctcaggtcgcccct 75
          ||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75




>41191_aqc-MIR398b:mirbase
          Length = 93

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 54 catgtgttctcaggtcgcccct 75
          ||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccct 91




>40729_mtr-MIR398b:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 54 catgtgttctcaggtcgcccct 75
          ||||||||||||||||||||||
Sbjct: 60 catgtgttctcaggtcgcccct 81




>40382_rco-MIR398b:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 54  catgtgttctcaggtcgcccct 75
           ||||||||||||||||||||||
Sbjct: 99  catgtgttctcaggtcgcccct 120




>42818_zma-MIR398b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  catgtgttctcaggtcgcccc 74
           |||||||||||||||||||||
Sbjct: 85  catgtgttctcaggtcgcccc 105




>42817_zma-MIR398a:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  catgtgttctcaggtcgcccc 74
           |||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137




>42645_tae-MIR398:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  catgtgttctcaggtcgcccc 74
           |||||||||||||||||||||
Sbjct: 83  catgtgttctcaggtcgcccc 103




>42588_sbi-MIR398:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  catgtgttctcaggtcgcccc 74
           |||||||||||||||||||||
Sbjct: 86  catgtgttctcaggtcgcccc 106




>41144_tcc-MIR398a:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  atgtgttctcaggtcgcccct 75
           |||||||||||||||||||||
Sbjct: 84  atgtgttctcaggtcgcccct 104




>42040_osa-MIR398b:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 tgtgttctcaggtcgcccct 75
          ||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccct 77




>40730_mtr-MIR398c:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 tgtgttctcaggtcgcccct 75
          ||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccct 81




>39882_aly-MIR398b:mirbase
          Length = 142

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 53  acatgtgttctcaggtcgcccct 75
           ||||||||||||||||| |||||
Sbjct: 88  acatgtgttctcaggtcacccct 110