miRNEST 2.0, an integrative microRNA resource :: BLAST
>40359_rco-MIR171a:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 53 tgctttttgattgagccgtgccaatatca 81
|||||||||||||||||||||||||||||
Sbjct: 57 tgctttttgattgagccgtgccaatatca 85
>41216_crt-MIR171:mirbase
Length = 201
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 gctttttgattgagccgtgccaatatca 81
||||||||||||||||||||||||||||
Sbjct: 155 gctttttgattgagccgtgccaatatca 182
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 tttttgattgagccgtgccaatatca 81
||||||||||||||||||||||||||
Sbjct: 66 tttttgattgagccgtgccaatatca 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 ttttgattgagccgtgccaatatca 81
|||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatca 91
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatca 143
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93
>41231_csi-MIR171a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 54 gctttttgattgagccgtgccaatatca 81
||||||||||||||||| ||||||||||
Sbjct: 61 gctttttgattgagccgcgccaatatca 88
>41211_ccl-MIR171:mirbase
Length = 321
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 54 gctttttgattgagccgtgccaatatca 81
||||||||||||||||| ||||||||||
Sbjct: 116 gctttttgattgagccgcgccaatatca 143
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 ttttgattgagccgtgccaatatc 80
||||||||||||||||||||||||
Sbjct: 81 ttttgattgagccgtgccaatatc 104
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 ttttgattgagccgtgccaatatc 80
||||||||||||||||||||||||
Sbjct: 118 ttttgattgagccgtgccaatatc 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93
>40364_rco-MIR171f:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 ttttgattgagccgtgccaatatc 80
||||||||||||||||||||||||
Sbjct: 83 ttttgattgagccgtgccaatatc 106
>40360_rco-MIR171b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatca 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89
>40062_ath-MIR171c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatca 108
>39851_aly-MIR171c:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatca 81
||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatca 95
>42769_zma-MIR171i:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ttgattgagccgtgccaatatca 81
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ttgattgagccgtgccaatatca 81
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>41540_sly-MIR171c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 55 ctttttgattgagccgtgccaatatca 81
|||||||||||||||| ||||||||||
Sbjct: 73 ctttttgattgagccgcgccaatatca 99
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 ttttgattgagccgtgccaatat 79
|||||||||||||||||||||||
Sbjct: 77 ttttgattgagccgtgccaatat 99
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tttgattgagccgtgccaatatc 80
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatca 76
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatca 81
||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatca 96
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 tttttgattgagccgtgccaatatca 81
||||| ||||||||||||||||||||
Sbjct: 64 tttttcattgagccgtgccaatatca 89
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatc 80
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatc 80
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42641_tae-MIR171b:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 gattgagccgtgccaatatca 81
|||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatca 110
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 tgattgagccgtgccaatatc 80
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
