miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactg 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactga 128




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactg 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactga 152




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactg 44



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 142 tcccgccttgcatcaactga 161




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 20 tcgcttggtgcaggtcgggaactg 43



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 141 tcccgccttgcatcaactga 160




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactg 44



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 126 tcccgccttgcatcaactga 145




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 6  tcgcttggtgcaggtcgggaactg 29



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactga 124




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactg 41




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactg 42




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcgggaactg 66




>42528_sbi-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 1  tcgcttggtgcaggtcgggaactgccgccg 30
          ||||||||||||| |||||| |||||||||
Sbjct: 21 tcgcttggtgcagatcgggacctgccgccg 50




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactga 120




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 87  tcccgccttgcatcaactga 106




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactga 121




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 24 tcgcttggtgcaggtcgggaac 45



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactga 127




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43