miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42661_tae-MIR1128:mirbase
          Length = 190

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 1  tactccctccgtccgaaaatagttgtcttcgaaatgaat 39
          ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaat 72



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 1   tactccctccgtccgaaaatagttgtcttcgaaatg 36
           ||||||||||||||| ||||||||||| || |||||
Sbjct: 162 tactccctccgtccggaaatagttgtcatcaaaatg 127



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 91  gacaagtatttccggacggagggagta 117
           ||||||||||| |||||||||||||||
Sbjct: 60  gacaagtattttcggacggagggagta 34



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 91  gacaagtatttccggacggagggagta 117
           ||||| |||||||||||||||||||||
Sbjct: 136 gacaactatttccggacggagggagta 162




>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 53  attntagttatagatacatccattntatttatttctaggacaagtatttccggacggagg 112
           ||| ||||| |||||||||||||| |  | |||| |  |||||||| ||||| |||||||
Sbjct: 70  attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129

                
Query: 113 gagta 117
           |||||
Sbjct: 130 gagta 134




>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 62/75 (82%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactccctccgtccgaaaatagttgtcttcgaaatgaatgtatctagacttaattntagt 60
           |||||||||||| || || || |||||   |||||  |||||||||||| || || ||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgta-ttttagt 50

                          
Query: 61  tatagatacatccat 75
           | |||||||||||||
Sbjct: 49  tctagatacatccat 35



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 82  tatttctaggacaagtatttccggacggagggagta 117
           |||||||  |||||||| ||||| ||||||||||||
Sbjct: 73  tatttctgcgacaagtaattccgaacggagggagta 108