miRNEST 2.0, an integrative microRNA resource :: BLAST
>40473_gma-MIR396a:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatactaataggatcaac 148
|||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 100 gcggttcaataaagctgtgggaagatacagatagggtcaac 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatc 46
||||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 87 gcggttcaataaagctgtgggaagatac 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcat 45
||||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 103 gcggttcaataaagctgtgggaagatac 130
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 94 gcggttcaataaagctgtgggaagatac 121
>41242_csi-MIR396b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 3 tatggtcctcttcgtcttattccacatctttcttgaactgcatc 46
|||| ||||||| || || ||||||| |||||||||||||||||
Sbjct: 1 tatgatcctctttgtatttttccacagctttcttgaactgcatc 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 84 gcggttcaataaagctgtgggaagatac 111
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 104 gcggttcaataaagctgtgggaagatac 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 12 cttcgtcttattccacatctttcttgaactgca 44
|||||| || ||||||| |||||||||||||||
Sbjct: 1 cttcgtattcttccacagctttcttgaactgca 33
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 104 gcggttcaataaagctgtgggaagatac 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 12 cttcgtcttattccacatctttcttgaactgca 44
|||||| || ||||||| |||||||||||||||
Sbjct: 1 cttcgtattcttccacagctttcttgaactgca 33
>40085_ath-MIR396a:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 120 gcggttcaataaagctgtgggaagatac 147
>39877_aly-MIR396a:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 130 gcggttcaataaagctgtgggaagatac 157
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatctg 48
||||||| |||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcatctg 59
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgata 134
|||||||||||||||||||||| ||||
Sbjct: 69 gcggttcaataaagctgtgggaagata 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatc 46
||||||| |||||||||||||||||
Sbjct: 6 ttccacagctttcttgaactgcatc 30
>40646_lja-MIR396:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 7 gtcctcttcgtcttattccacatctttcttgaactgcat 45
|||||||| || || ||||||| ||||||||||||||||
Sbjct: 1 gtcctctttgtattcttccacagctttcttgaactgcat 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgata 134
|||||||||||||||||||||| ||||
Sbjct: 73 gcggttcaataaagctgtgggaagata 99
>42814_zma-MIR396h:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgcatct 73
>42808_zma-MIR396b:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42472_ssp-MIR396:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>42461_sof-MIR396:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42027_osa-MIR396b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcatct 47
||||||| ||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcatct 36
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtggga 129
||||||||||||||||||||||
Sbjct: 99 gcggttcaataaagctgtggga 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcat 45
||||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>42813_zma-MIR396g:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 ttccacatctttcttgaactgcatc 46
||||||| |||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcatc 87
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 111 gttcaataaagctgtgggatgatac 135
||||||||||||||||||| |||||
Sbjct: 113 gttcaataaagctgtgggaagatac 137
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 4 atggtcctcttcgtcttattccacatctttcttgaactgc 43
|||| |||||| || || ||||||| ||||||||||||||
Sbjct: 3 atggccctctttgtattcttccacagctttcttgaactgc 42
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcat 45
||||||| ||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ttccacatctttcttgaactgcat 45
||||||| ||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
