miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42168_osa-MIR818e:mirbase
          Length = 225

 Score = 63.9 bits (32), Expect = 6e-11
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 20  cctccgtcccataatataaaggattttaagtttttg 55
           ||||||||||||||||||| ||||||||||||||||
Sbjct: 225 cctccgtcccataatataagggattttaagtttttg 190



 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                  
Query: 23 ccgtcccataatataaaggattttaagtttttgcctacaacatttgaccactcgtc 78
          |||||| ||||||||| ||||||| ||||||||| | ||   ||||||||||||||
Sbjct: 3  ccgtcctataatataagggattttgagtttttgcttgcactgtttgaccactcgtc 58



 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 187 aataggacgagtgatcaaatgttgcaagcaaaaattgaaaatcccttatatt 238
           |||| |||||||| |||||   |||||||||||| | |||||||||||||||
Sbjct: 63  aataagacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatatt 12




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 15  tactccctccgtcccataatataaaggatttta 47
           |||||||||||||||||||||||| ||||||||
Sbjct: 127 tactccctccgtcccataatataagggatttta 95



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 15 tactccctccgtcccataatataaaggatttta 47
          ||||| |||| ||||||||||||| ||||||||
Sbjct: 15 tactctctccatcccataatataagggatttta 47



 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 224 aaaatcccttatatttcgggacgtagggagta 255
           |||||||||||||||  |||||| ||||||||
Sbjct: 96  aaaatcccttatattatgggacggagggagta 127




>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 tactccctccgtcccataatataa 38
          ||||||||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataa 41



 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 15 tactccctccgtcccataatataa 38
          ||||||||||||| ||||||||||
Sbjct: 99 tactccctccgtctcataatataa 76




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 14 ctactccctccgtcccataatat 36
          |||||||||||||||||||||||
Sbjct: 11 ctactccctccgtcccataatat 33



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  ctactccctccgtcccataat 34
           |||||||||||||||||||||
Sbjct: 143 ctactccctccgtcccataat 123




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 20  cctccgtcccataatataaaggatttt 46
           ||||||||||||||||||| |||||||
Sbjct: 113 cctccgtcccataatataagggatttt 87



 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 20 cctccgtcccataatataaaggatttta 47
          |||||||||||||||||||  |||||||
Sbjct: 1  cctccgtcccataatataagagatttta 28




>42225_osa-MIR1442:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  ctactccctccgtcccataatataaaggat 43
           ||||||| ||||||||||||||||| ||||
Sbjct: 116 ctactccatccgtcccataatataagggat 145




>42166_osa-MIR818c:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 22  tccgtcccataatataaaggatttt 46
           ||||||||||||||||| |||||||
Sbjct: 164 tccgtcccataatataagggatttt 140




>42164_osa-MIR818a:mirbase
          Length = 144

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 22  tccgtcccataatataaaggatttt 46
           ||||||||||||||||| |||||||
Sbjct: 139 tccgtcccataatataagggatttt 115