miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactg 44
Score = 69.9 bits (35), Expect = 8e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 160 gcgaattggatcccgccttgcatcaactgaatccgagac 198
||||||||||||||||||||||||||||||||| |||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggagac 170
>41210_ccl-MIR168:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaactg 43
Score = 69.9 bits (35), Expect = 8e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 160 gcgaattggatcccgccttgcatcaactgaatccgagac 198
||||||||||||||||||||||||||||||||| |||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggagac 169
>41101_tcc-MIR168:mirbase
Length = 167
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactg 44
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 161 cgaattggatcccgccttgcatcaactgaatccgagac 198
|||||||||||||||||||||||||||||||| |||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagac 154
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 69.9 bits (35), Expect = 8e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 25 ggtctctaattcgcttggtgcaggtcgggaactgtttcg 63
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcg 39
Score = 63.9 bits (32), Expect = 5e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 162 gaattggatcccgccttgcatcaactgaatccgaga 197
||||||||||||||||||||||||||||||| ||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggaga 136
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 159 agcgaattggatcccgccttgcatcaactgaatc 192
||||||||||||||||||||||||||||||||||
Sbjct: 122 agcgaattggatcccgccttgcatcaactgaatc 155
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 25 ggtctctaattcgcttggtgcaggtcgggaactgtttcg 63
||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcg 39
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 23 gcggtctctaattcgcttggtgcaggtcgggaac 56
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 161 cgaattggatcccgccttgcatcaactgaatc 192
||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatc 109
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 25 ggtctctaattcgcttggtgcaggtcgggaac 56
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 168 gatcccgccttgcatcaactgaatccgagac 198
||||||||||||||||||||||||| |||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>40355_rco-MIR168:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 30 ctaattcgcttggtgcaggtcgggaactgtttcgctttt 68
||||||||||||||||||||||||||||| || ||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactgattggctttt 39
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 162 gaattggatcccgccttgcatcaactgaatc 192
|||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatc 127
>40044_ath-MIR168b:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 8e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
|||||||||| ||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactg 42
>39833_aly-MIR168b:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 8e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
|||||||||| ||||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaactg 66
>40043_ath-MIR168a:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 164 attggatcccgccttgcatcaactgaatc 192
|||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatc 124
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 attcgcttggtgcaggtcgggaac 56
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 164 attggatcccgccttgcatcaactgaatc 192
|||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatc 130
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 attcgcttggtgcaggtcgggaac 56
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>40271_bna-MIR168:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 21 cggcggtctctaattcgcttggtgcaggtcgggaactg 58
|||||| |||| | ||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactg 41
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 167 ggatcccgccttgcatcaactgaatccgag 196
||||||||||||| ||||| ||||||||||
Sbjct: 94 ggatcccgccttgtatcaagtgaatccgag 123
>42742_zma-MIR168b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 167 ggatcccgccttgcatcaactgaatc 192
||||||||||||||||||| ||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatc 88
>42528_sbi-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 168 gatcccgccttgcatcaactgaatccgag 196
|||||||||||||| ||| ||||||||||
Sbjct: 66 gatcccgccttgcaccaagtgaatccgag 94
>41963_osa-MIR168b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 37 gcttggtgcaggtcgggaactgtt 60
||||||||||| ||||||||||||
Sbjct: 13 gcttggtgcagctcgggaactgtt 36
