miRNEST 2.0, an integrative microRNA resource :: BLAST
>41875_far-MIR396:mirbase
Length = 170
Score = 85.7 bits (43), Expect = 6e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgcg 47
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcg 47
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 74 atggttcaagaaagtccttggaaaacatgcccgc 107
||||||||||||||||||||||||||||||||||
Sbjct: 100 atggttcaagaaagtccttggaaaacatgcccgc 133
>41791_bdi-MIR396a:mirbase
Length = 209
Score = 75.8 bits (38), Expect = 6e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgc 46
|||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtgcgc 66
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcccgc 107
||||||||||||||||||||||||||||||||| ||||
Sbjct: 149 gttgatggttcaagaaagtccttggaaaacatggccgc 186
>42033_osa-MIR396f:mirbase
Length = 176
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 gccatgctctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 141 gttgatagttcaagaaagtccttggaaaacatg 173
>42032_osa-MIR396f:mirbase
Length = 176
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 gccatgctctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 141 gttgatagttcaagaaagtccttggaaaacatg 173
>42031_osa-MIR396e:mirbase
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 148 gttgatggttcaagaaagcccatggaaaccatgcc 182
>42030_osa-MIR396e:mirbase
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 148 gttgatggttcaagaaagcccatggaaaccatgcc 182
>42029_osa-MIR396d:mirbase
Length = 142
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 9 gcgggcatgctttccacaggctttcttgaactgtgaactcg 49
>41796_bdi-MIR396f:mirbase
Length = 161
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 8 gcgggcatgctttccacaggctttcttgaactgtgaactcg 48
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 119 gttgatggttcaagaaagcccatggaaaccatgcc 153
>41792_bdi-MIR396b:mirbase
Length = 189
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 20 gcgggcatgctttccacaggctttcttgaactgtgaactcg 60
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 131 gttgatggttcaagaaagcccatggaaaccatgcc 165
>42810_zma-MIR396d:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 catgctctccacaggctttcttgaactgtcaactcg 41
|||||| |||||||||||||||||||||| ||||||
Sbjct: 5 catgctttccacaggctttcttgaactgtgaactcg 40
>42809_zma-MIR396c:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 catgctctccacaggctttcttgaactgtcaactcg 41
|||||| |||||||||||||||||||||| ||||||
Sbjct: 5 catgctttccacaggctttcttgaactgtgaactcg 40
>42585_sbi-MIR396d:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaa 96
|||||||||||||||||||||||||||
Sbjct: 70 gttgatggttcaagaaagtccttggaa 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 ctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||| ||||||
Sbjct: 1 ctccacaggctttcttgaactgtgaactcg 30
>42586_sbi-MIR396e:mirbase
Length = 189
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 161 gttgatggttcaagaaagcccatggaaa 188
