miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40754_mtr-MIR2087:mirbase
          Length = 265

 Score =  400 bits (202), Expect = e-112
 Identities = 244/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcttgatgaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcttgatgaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacga 60

                                                                       
Query: 61  aaatgcccatgtagcagtttactaccgaagtaaagaaccggctgcagttaactgctgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaatgcccatgtagcagtttactaccgaagtaaagaaccggctgcagttaactgctgaag 120

                                                                       
Query: 121 tgtgaagnnnnnnnnnnnnnnnnnnnnncgtcggcagttaactgcagtcggtttcttact 180
           |||||||                     ||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgaagtttttttttttttttctttttcgtcggcagttaactgcagtcggtttcttact 180

                                                                       
Query: 181 tcggtagttaaccgttgcaggggcattttcgtcatttacatgtgtttttcagccctatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggtagttaaccgttgcaggggcattttcgtcatttacatgtgtttttcagccctatca 240

                                    
Query: 241 tatgtgtcaacagcaattttctagc 265
           |||||||||||||||||||||||||
Sbjct: 241 tatgtgtcaacagcaattttctagc 265



 Score =  103 bits (52), Expect = 7e-23
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                       
Query: 154 gcagttaactgcagtcggtttcttacttcggtagttaaccgttgcaggggcattttcgtc 213
           |||||||||||||| |||||  ||||||||||||| ||| | | || |||||||||||||
Sbjct: 115 gcagttaactgcagccggttctttacttcggtagtaaactgctacatgggcattttcgtc 56

                                                           
Query: 214 atttacatgtgtttttcagccctatcatatgtgtcaacagcaattttc 261
            ||||||| ||||||| ||| |||||||||||||||| |||| |||||
Sbjct: 55  ttttacatatgttttttagctctatcatatgtgtcaagagcagttttc 8



 Score =  103 bits (52), Expect = 7e-23
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacgaaaatgcc 67
           ||||| |||| |||||||||||||||| ||| ||||||| ||||||| ||||||||||||
Sbjct: 261 gaaaattgctgttgacacatatgatagggctgaaaaacacatgtaaatgacgaaaatgcc 202

                                                           
Query: 68  catgtagcagtttactaccgaagtaaagaaccggctgcagttaactgc 115
           | || | | ||| |||||||||||||  ||||| ||||||||||||||
Sbjct: 201 cctgcaacggttaactaccgaagtaagaaaccgactgcagttaactgc 154




>40875_mtr-MIR2629c:mirbase
          Length = 61

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 151 tcggcagttaactgcagtcggtttcttacttcggtagttaac 192
           |||| |||||||||||||||||| | || ||||| |||||||
Sbjct: 10  tcggtagttaactgcagtcggttccataattcggcagttaac 51




>40874_mtr-MIR2629b:mirbase
          Length = 61

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 151 tcggcagttaactgcagtcggtttcttacttcggtagttaac 192
           |||| |||||||||||||||||| | || ||||| |||||||
Sbjct: 10  tcggtagttaactgcagtcggttccataattcggcagttaac 51