miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40779_mtr-MIR2199:mirbase
          Length = 504

 Score =  321 bits (162), Expect = 2e-88
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgctgtgcaattgtgatccgttctagtgtatcatacaattcacagcttaatattgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   atgtgctgtgcaattgtgatccgttctagtgtatcatacaattcacagcttaatattgat 62

                                                                       
Query: 61  taattccagtttattaatttggaatatatatcttttgatagaggcctaggtcactaattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  taattccagtttattaatttggaatatatatcttttgatagaggcctaggtcactaattt 122

                                                     
Query: 121 tcttgttttaatatatttaagaaaatatcatatgatatcttc 162
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcttgttttaatatatttaagaaaatatcatatgatatcttc 164



 Score =  268 bits (135), Expect = 2e-72
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 163 tacatatatcaagattaaccgtatagtttaatggcctttatatgaaaatttttatgttct 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tacatatatcaagattaaccgtatagtttaatggcctttatatgaaaatttttatgttct 403

                                                                       
Query: 223 taaactaaactggaaatatttgagagctgggatatttttgatacactagcacggatcacc 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 taaactaaactggaaatatttgagagctgggatatttttgatacactagcacggatcacc 463

                          
Query: 283 gttgtgggtcacgta 297
           |||||||||||||||
Sbjct: 464 gttgtgggtcacgta 478