miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41315_ptc-MIR162c:mirbase
          Length = 107

 Score =  170 bits (86), Expect = 1e-43
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagaagacactggaggcagcggttcatcgatcttttcctgaagannnnnnngttttaca 60
           |||||||||||||||||||||||||||||||||||||||||||||       ||||||||
Sbjct: 1   tgagaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttaca 60

                                                          
Query: 61  cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score =  170 bits (86), Expect = 1e-43
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagaagacactggaggcagcggttcatcgatcttttcctgaagannnnnnngttttaca 60
           |||||||||||||||||||||||||||||||||||||||||||||       ||||||||
Sbjct: 1   tgagaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttaca 60

                                                          
Query: 61  cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 89.7 bits (45), Expect = 4e-19
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaagacactggaggcagcggttcatcgatcttttcctgaagannnnnnngttttacacga 63
           ||||||||||||||||||||||||||||||| ||||||   |       ||||  |||||
Sbjct: 4   gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63

                                                     
Query: 64  acaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
           | |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 64  aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 5  aagacactggaggcagcggttcatcgatcttttcctga 42
          |||||||||||||||||||||||||||||| |||||||
Sbjct: 18 aagacactggaggcagcggttcatcgatctcttcctga 55



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 75  cgatcgataaacctctgcatccag 98
           ||||||||||||||||||||||||
Sbjct: 91  cgatcgataaacctctgcatccag 114




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 5  aagacactggaggcagcggttcatcgatcttttcctg 41
          |||||||||||||||||||||||||||||| ||||||
Sbjct: 15 aagacactggaggcagcggttcatcgatctcttcctg 51



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 75  cgatcgataaacctctgcatccag 98
           ||||||||||||||||||||||||
Sbjct: 88  cgatcgataaacctctgcatccag 111




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatcttttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 2  cactggaggcagcggttcatcgatctcttcctg 34



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 75  cgatcgataaacctctgcatccagtgctt 103
           |||||||||||||||||||||||| ||||
Sbjct: 73  cgatcgataaacctctgcatccagcgctt 101




>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatcttttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcctg 43



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 66  aacacgaaccgatcgataaacctctgcatccag 98
           |||| ||| ||||||||||||||||||||||||
Sbjct: 68  aacatgaatcgatcgataaacctctgcatccag 100




>41578_vvi-MIR162:mirbase
          Length = 103

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43
          |||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 2  gaagtcactggatgcagcggttcatcgatctcttcctgaa 41



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tcgataaacctctgcatccag 98
          |||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccag 93




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43
          |||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 3  gaagtcactggatgcagcggttcatcgatctcttcctgaa 42



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 75 cgatcgataaacctctgcatccag 98
          ||||||||||||||||||||||||
Sbjct: 70 cgatcgataaacctctgcatccag 93




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 9  cactggaggcagcggttcatcgatcttttcctgaa 43
          ||||||| |||||||||||||||||| ||||||||
Sbjct: 19 cactggatgcagcggttcatcgatctgttcctgaa 53



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tcgataaacctctgcatccag 98
           |||||||||||||||||||||
Sbjct: 87  tcgataaacctctgcatccag 107




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 11 ctggaggcagcggttcatcgatcttttcctg 41
          |||||||||||||||||||||||| ||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  gatcgataaacctctgcatccag 98
           |||||||||||||||||||||||
Sbjct: 87  gatcgataaacctctgcatccag 109




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 11 ctggaggcagcggttcatcgatcttttcctg 41
          |||||||||||||||||||||||| ||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  gatcgataaacctctgcatccag 98
           |||||||||||||||||||||||
Sbjct: 134 gatcgataaacctctgcatccag 156




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 4   gaagacactggaggcagcggttcatcgatc 33
           |||| |||||||||||||||||||||||||
Sbjct: 82  gaagtcactggaggcagcggttcatcgatc 111



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 75  cgatcgataaacctctgcatccag 98
           ||||||||||||||||||||||||
Sbjct: 158 cgatcgataaacctctgcatccag 181




>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 75  cgatcgataaacctctgcatccagt 99
           |||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccagt 164




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 75  cgatcgataaacctctgcatccagtgctt 103
           |||||||||||||||||||||||| ||||
Sbjct: 110 cgatcgataaacctctgcatccagcgctt 138



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ctggaggcagcggttcatcgatc 33
          |||||||||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 75  cgatcgataaacctctgcatccag 98
           ||||||||||||||||||||||||
Sbjct: 104 cgatcgataaacctctgcatccag 127




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 75 cgatcgataaacctctgcatccag 98
          ||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccag 99



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ctggaggcagcggttcatcgatc 33
          |||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34




>41736_bdi-MIR162:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 75  cgatcgataaacctctgcatcc 96
           ||||||||||||||||||||||
Sbjct: 108 cgatcgataaacctctgcatcc 129




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tcgataaacctctgcatccag 98
           |||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tcgataaacctctgcatccag 98
          |||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99




>41930_osa-MIR162b:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 75  cgatcgataaacctctgcatccag 98
           |||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124