miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41340_ptc-MIR167b:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 agggaaaaagtgaagctgccagcatgatctatctttggttagagaaagaaaggactaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggaaaaagtgaagctgccagcatgatctatctttggttagagaaagaaaggactaacc 60
Query: 61 ctagctaggtcatgctgtgacagcctcactccttcc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctagctaggtcatgctgtgacagcctcactccttcc 96
>41342_ptc-MIR167d:mirbase
Length = 105
Score = 113 bits (57), Expect = 2e-26
Identities = 92/105 (87%), Gaps = 9/105 (8%)
Strand = Plus / Plus
Query: 1 agggaaaaagtgaagctgccagcatgatctatctttggttagagaa---------agaaa 51
|||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 agggaaaaggtgaagctgccagcatgatctatctttggttagagaaggatagaagcgaaa 60
Query: 52 ggactaaccctagctaggtcatgctgtgacagcctcactccttcc 96
| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 gaactaaccctagctaggtcatgctctgacagcctcactccttcc 105
>40441_gma-MIR167a:mirbase
Length = 119
Score = 99.6 bits (50), Expect = 4e-22
Identities = 87/98 (88%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 3 ggaaaaagtgaagctgccagcatgatctatctttggttagaga----aagaaaggactaa 58
||||||||||||||||||||||||||||| ||||||||||||| ||| || ||||
Sbjct: 13 ggaaaaagtgaagctgccagcatgatctacctttggttagagagctcaag--agtgctaa 70
Query: 59 ccctagctaggtcatgctgtgacagcctcactccttcc 96
|||| ||||||||||||||||||||||||||||||||
Sbjct: 71 ccctgactaggtcatgctgtgacagcctcactccttcc 108
>40444_gma-MIR167d:mirbase
Length = 121
Score = 85.7 bits (43), Expect = 5e-18
Identities = 86/100 (86%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 agggaaaaagtgaagctgccagcatgatctatctttggtta----gagaaagaaaggact 56
||||||||||||||||||||||||||||||| ||||||||| ||| ||| || ||
Sbjct: 11 agggaaaaagtgaagctgccagcatgatctagctttggttagtgggagccagagagtgct 70
Query: 57 aaccctagctaggtcatgctgtgacagcctcactccttcc 96
|||||| ||||||||||||||| |||||||||||||||
Sbjct: 71 aaccctcactaggtcatgctgtgctagcctcactccttcc 110
>40442_gma-MIR167b:mirbase
Length = 121
Score = 81.8 bits (41), Expect = 8e-17
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 3 ggaaaaagtgaagctgccagcatgatctatctttggtta----gagaaagaaaggactaa 58
||||||||||||||||||||||||||||| ||||||||| ||| ||| || ||||
Sbjct: 13 ggaaaaagtgaagctgccagcatgatctagctttggttagtgggagcgagagagtgctaa 72
Query: 59 ccctagctaggtcatgctgtgacagcctcactccttcc 96
|||| ||||||||||||||| |||||||||||||||
Sbjct: 73 ccctcactaggtcatgctgtgctagcctcactccttcc 110
>41099_tcc-MIR167b:mirbase
Length = 138
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 3 ggaaaaagtgaagctgccagcatgatctatctttggttag 42
||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ggaaaaagtgaagctgccagcatgatctatctttggttag 52
Score = 75.8 bits (38), Expect = 5e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 55 ctaaccctagctaggtcatgctgtgacagcctcactccttcc 96
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 83 ctaaccctagctaggtcatgctctgacagcctcactccttcc 124
>41049_ghr-MIR167:mirbase
Length = 105
Score = 75.8 bits (38), Expect = 5e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 55 ctaaccctagctaggtcatgctgtgacagcctcactccttcc 96
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 63 ctaaccctagctaggtcatgctgcgacagcctcactccttcc 104
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 gggaaaaagtgaagctgccagcatgatctatctt 35
||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaaaaagtgaagctgccagcatgatctatctt 34
>40352_rco-MIR167a:mirbase
Length = 130
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 55 ctaaccctagctaggtcatgctgtgacagcctcactccttc 95
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 90 ctaaccctagctaggtcatgctctgacagcctcactccttc 130
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatctatctttggttag 42
|||||||||||||||||||||| ||||||||||
Sbjct: 5 gtgaagctgccagcatgatctagctttggttag 37
>39829_aly-MIR167b:mirbase
Length = 195
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 agggaaaaagtgaagctgccagcatgatctatctttggtta 41
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 45 agggaacaagtgaagctgccagcatgatctatctttggtta 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 57 aaccctagctaggtcatgctgtgacagcctcactccttcc 96
||||| |||||||||||||| |||||||||||||||||||
Sbjct: 114 aacccaagctaggtcatgctctgacagcctcactccttcc 153
>40040_ath-MIR167b:mirbase
Length = 109
Score = 71.9 bits (36), Expect = 8e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 2 gggaaaaagtgaagctgccagcatgatctatctttggtta 41
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaacaagtgaagctgccagcatgatctatctttggtta 40
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 57 aaccctagctaggtcatgctgtgacagcctcactccttcc 96
||||| |||||||||||||| |||||||||||||||||||
Sbjct: 69 aacccaagctaggtcatgctctgacagcctcactccttcc 108
>41594_vvi-MIR167d:mirbase
Length = 115
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 55 ctaaccctagctaggtcatgctgtgacagcctcactccttcc 96
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 70 ctaaccctagctaggtcatgccctgacagcctcactccttcc 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 agggaaaaagtgaagctgccagcatgatctatctttgg 38
|||||| |||||||||||||||||||||||| ||||||
Sbjct: 1 agggaataagtgaagctgccagcatgatctagctttgg 38
>42527_sbi-MIR167i:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatctatctttggtt 40
||||||||||||||||||||||| ||||||||
Sbjct: 1 agtgaagctgccagcatgatctagctttggtt 32
>40676_mtr-MIR167:mirbase
Length = 320
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 aaaagtgaagctgccagcatgatctatctttggtta 41
|||||||||||||||||||||||||| ||||||||
Sbjct: 1 aaaagtgaagctgccagcatgatctaggtttggtta 36
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 56 taaccctagctaggtcatgctgtgacagcctcactcctt 94
||||||| ||||||||||||||| |||||||||||||
Sbjct: 282 taaccctgactaggtcatgctgtgctagcctcactcctt 320
>41749_bdi-MIR167a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatctatct 34
|||||||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatctatct 34
>42734_zma-MIR167d:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>42733_zma-MIR167c:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>42731_zma-MIR167a:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>42638_tae-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 16 agtgaagctgccagcatgatcta 38
>41953_osa-MIR167c:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 64 gctaggtcatgctgtgacagcctcactccttcc 96
|||||||||||||| | |||||||||| |||||
Sbjct: 119 gctaggtcatgctgcggcagcctcacttcttcc 151
>41951_osa-MIR167a:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 12 agtgaagctgccagcatgatcta 34
>41750_bdi-MIR167b:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatcta 31
|||||||||||||||||||||||
Sbjct: 30 agtgaagctgccagcatgatcta 52
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 64 gctaggtcatgctgtgacagcctcactccttcc 96
|||||||||||||| | |||||||||| |||||
Sbjct: 135 gctaggtcatgctgcggcagcctcacttcttcc 167
>42732_zma-MIR167b:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatcta 31
||||||||||||||||||||||
Sbjct: 18 gtgaagctgccagcatgatcta 39
>42639_tae-MIR167b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 agtgaagctgccagcatgatctatct 34
|||||||||| |||||||||||||||
Sbjct: 16 agtgaagctgacagcatgatctatct 41
>41952_osa-MIR167b:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatcta 31
||||||||||||||||||||||
Sbjct: 17 gtgaagctgccagcatgatcta 38
>42737_zma-MIR167g:mirbase
Length = 243
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42523_sbi-MIR167e:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42520_sbi-MIR167b:mirbase
Length = 198
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatcta 21
>42519_sbi-MIR167a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatcta 21
>42469_ssp-MIR167b:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 2 gtgaagctgccagcatgatct 22
>42458_sof-MIR167b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42457_sof-MIR167a:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>41958_osa-MIR167h:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>41957_osa-MIR167g:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41533_sly-MIR167:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatcta 41
>40353_rco-MIR167b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 6 tgaagctgccagcatgatcta 26
>40317_bra-MIR167d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40316_bra-MIR167c:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40315_bra-MIR167b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40314_bra-MIR167a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40270_bna-MIR167c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40269_bna-MIR167b:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40268_bna-MIR167a:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40039_ath-MIR167a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
>39828_aly-MIR167a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatcta 31
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>42740_zma-MIR167j:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 2 tgaagctgccagcatgatct 21
