miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41344_ptc-MIR167f:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 ctctatcagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctatcagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaac 60
Query: 61 agatcatgtggcagtttcacctgttgt 87
|||||||||||||||||||||||||||
Sbjct: 61 agatcatgtggcagtttcacctgttgt 87
>41345_ptc-MIR167g:mirbase
Length = 86
Score = 121 bits (61), Expect = 9e-29
Identities = 77/81 (95%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 3 ctatcagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacag 62
|||||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||
Sbjct: 3 ctatcagttgaagctgccagcatgatcttaacctccctcctttgtcgaggaaag-aacag 61
Query: 63 atcatgtggcagtttcacctg 83
|||||||||||||||||||||
Sbjct: 62 atcatgtggcagtttcacctg 82
>41228_csi-MIR167b:mirbase
Length = 123
Score = 95.6 bits (48), Expect = 5e-21
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 3 ctatcagttgaagctgccagcatgatcttagccttcctcctttg-ttgaggaaagaaaca 61
||||||| |||||||||||||||||||||| | ||||||||||| | |||||| || |||
Sbjct: 12 ctatcagatgaagctgccagcatgatcttaactttcctcctttgctcgaggaatgataca 71
Query: 62 gatcatgtggcagtttcacctgtt 85
||||||| ||||||||||||||||
Sbjct: 72 gatcatgcggcagtttcacctgtt 95
>40353_rco-MIR167b:mirbase
Length = 80
Score = 81.8 bits (41), Expect = 7e-17
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 6 tcagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacagatc 65
||||||||||||||||||||||||| | |||||||| | |||||||| || | ||||||
Sbjct: 1 tcagttgaagctgccagcatgatctaaatcttcctccctcgttgaggagag-atcagatc 59
Query: 66 atgtggcagtttcacctgttg 86
|||||||||||||||| ||||
Sbjct: 60 atgtggcagtttcacccgttg 80
>40446_gma-MIR167f:mirbase
Length = 109
Score = 71.9 bits (36), Expect = 7e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacagatca 66
|||||||||||||||||||||||||| | | |||| ||| || |||||| | |||||||
Sbjct: 15 cagttgaagctgccagcatgatcttaacttccctcacttgctgtggaaag-atcagatca 73
Query: 67 tgtggcagtttcacct 82
||||||||||||||||
Sbjct: 74 tgtggcagtttcacct 89
>40445_gma-MIR167e:mirbase
Length = 109
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacagatca 66
|||||||||||||||||||||||||| | | |||| ||| | |||||| | |||||||
Sbjct: 15 cagttgaagctgccagcatgatcttaacttccctcacttgccgtggaaag-atcagatca 73
Query: 67 tgtggcagtttcacct 82
||||||||||||||||
Sbjct: 74 tgtggcagtttcacct 89
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 3 ctatcagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacag 62
|||||||||||||||||||||||||||| | | | | ||| || ||| | || | |||
Sbjct: 3 ctatcagttgaagctgccagcatgatctaaacttgcttccctttgtgaacagag-atcag 61
Query: 63 atcatgtggcagtttcacctgttgt 87
|||||||||||||||||||||||||
Sbjct: 62 atcatgtggcagtttcacctgttgt 86
>41100_tcc-MIR167c:mirbase
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 72/84 (85%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 5 atcagttgaagctgccagcatgatcttagccttcctcc--tttgttgaggaaagaaacag 62
|||||||||||||||||||||||||||| ||||| | ||| | ||||||| | |||
Sbjct: 15 atcagttgaagctgccagcatgatcttaattttccttctttttatcaaggaaag-atcag 73
Query: 63 atcatgtggcagtttcacctgttg 86
||||| ||||||||||||||||||
Sbjct: 74 atcatatggcagtttcacctgttg 97
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 agatcatgtggcagtttcacctgttg 86
||||||||||||||||||||||||||
Sbjct: 69 agatcatgtggcagtttcacctgttg 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
>40354_rco-MIR167c:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 agatcatgtggcagtttcacctgttg 86
||||||||||||||||||||||||||
Sbjct: 51 agatcatgtggcagtttcacctgttg 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 3 agttgaagctgccagcatgatct 25
>40401_ahy-MIR167:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatctta 32
|||||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatctta 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||||||||||||||||||
Sbjct: 77 cagatcatgtggcagtttcacct 99
>40400_ahy-MIR167:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatctta 32
|||||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatctta 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||||||||||||||||||
Sbjct: 77 cagatcatgtggcagtttcacct 99
>41593_vvi-MIR167c:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
>41533_sly-MIR167:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 15 cagttgaagctgccagcatgatct 38
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 61 agatcatgtggcagtttcacctg 83
||||||||||| |||||||||||
Sbjct: 63 agatcatgtggtagtttcacctg 85
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 17 cagttgaagctgccagcatgatct 40
>40632_gso-MIR167a:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 5 cagttgaagctgccagcatgatct 28
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 58 aacagatcatgtggcagtttcacctgttg 86
||||||||||||||| | |||||||||||
Sbjct: 51 aacagatcatgtggctgcttcacctgttg 79
>40447_gma-MIR167g:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 4 cagttgaagctgccagcatgatct 27
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 58 aacagatcatgtggcagtttcacctgttg 86
||||||||||||||| | |||||||||||
Sbjct: 50 aacagatcatgtggctgcttcacctgttg 78
>41343_ptc-MIR167e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatct 30
>41280_ctr-MIR167:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 21 agttgaagctgccagcatgatct 43
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||| ||||||||||||||
Sbjct: 78 cagatcatctggcagtttcacct 100
>41227_csi-MIR167a:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 12 agttgaagctgccagcatgatct 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||| ||||||||||||||
Sbjct: 69 cagatcatctggcagtttcacct 91
>41209_ccl-MIR167b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatct 40
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||| ||||||||||||||
Sbjct: 75 cagatcatctggcagtttcacct 97
>41208_ccl-MIR167a:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 21 agttgaagctgccagcatgatct 43
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttcacct 82
|||||||| ||||||||||||||
Sbjct: 78 cagatcatctggcagtttcacct 100
>40645_lja-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatct 40
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 58 aacagatcatgtggcagtttcacctgttg 86
|||||||||| |||||| |||||||||||
Sbjct: 69 aacagatcatatggcagcttcacctgttg 97
>42738_zma-MIR167h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 19 gttgaagctgccagcatgatct 40
>42521_sbi-MIR167c:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 18 gttgaagctgccagcatgatct 39
>41752_bdi-MIR167d:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 29 gttgaagctgccagcatgatct 50
>41591_vvi-MIR167a:mirbase
Length = 351
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>41346_ptc-MIR167h:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 3 ctatcagttgaagctgccagcatgatcttagccttcct 40
|||| |||||||||||||| |||||||| ||| |||||
Sbjct: 3 ctattagttgaagctgccaacatgatctgagctttcct 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 agatcatgtggcagtttcacct 82
||||||||||||||||||||||
Sbjct: 65 agatcatgtggcagtttcacct 86
>40443_gma-MIR167c:mirbase
Length = 375
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>42739_zma-MIR167i:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 ttgaagctgccagcatgatct 40
>41229_csi-MIR167c:mirbase
Length = 341
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 10 ttgaagctgccagcatgatct 30
>42740_zma-MIR167j:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 2 tgaagctgccagcatgatct 21
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 cagatcatgtggcagtttca 79
||||||||||||||||||||
Sbjct: 87 cagatcatgtggcagtttca 106
>42737_zma-MIR167g:mirbase
Length = 243
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42736_zma-MIR167f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42735_zma-MIR167e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42734_zma-MIR167d:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 17 tgaagctgccagcatgatct 36
>42733_zma-MIR167c:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 17 tgaagctgccagcatgatct 36
>42732_zma-MIR167b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatct 38
>42731_zma-MIR167a:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 17 tgaagctgccagcatgatct 36
>42638_tae-MIR167:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatct 37
>42527_sbi-MIR167i:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatct 30
||||||||||||||||||||
Sbjct: 3 tgaagctgccagcatgatct 22
