miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41524_ptc-MIR1450:mirbase
          Length = 151

 Score =  299 bits (151), Expect = 3e-82
 Identities = 151/151 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtcaattaggtcagttgtgtagtctgacccgagccattgaagacaatcatttgttggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagtcaattaggtcagttgtgtagtctgacccgagccattgaagacaatcatttgttggt 60

                                                                       
Query: 61  gtctcattggatttgttacctgacagtgtttatccaacaaatgattctcttcaatggctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtctcattggatttgttacctgacagtgtttatccaacaaatgattctcttcaatggctc 120

                                          
Query: 121 ggtcaggttacacaagcaatctagttggctc 151
           |||||||||||||||||||||||||||||||
Sbjct: 121 ggtcaggttacacaagcaatctagttggctc 151



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 94  ccaacaaatgattctcttcaatggctcgg 122
           ||||||||||||| |||||||||||||||
Sbjct: 59  ccaacaaatgattgtcttcaatggctcgg 31



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 31  ccgagccattgaagacaatcatttgttgg 59
           ||||||||||||||| |||||||||||||
Sbjct: 122 ccgagccattgaagagaatcatttgttgg 94