miRNEST 2.0, an integrative microRNA resource :: BLAST
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 1 ggaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ggaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaat 46
Query: 61 tggccaggaagagatcgatgaaccgctgcctccagtgtcttcc 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tggccaggaagagatcgatgaaccgctgcctccagtgtcttcc 3
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 1 ggaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaat 60
|||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 105 ggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaaa 46
Query: 61 tggccaggaagagatcgatgaaccgctgcctccagtgtcttc 102
| |||||| |||||||||||||||||||||||||||||||
Sbjct: 45 tcttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 4
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 1 ggaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaat 60
|||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 105 ggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaaa 46
Query: 61 tggccaggaagagatcgatgaaccgctgcctccagtgtcttc 102
| |||||| |||||||||||||||||||||||||||||||
Sbjct: 45 tcttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 4
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 79.8 bits (40), Expect = 4e-16
Identities = 87/101 (86%), Gaps = 5/101 (4%)
Strand = Plus / Minus
Query: 5 gcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaa----acaaaaaat 60
||||||||||||||||||||||||||| ||||||| ||| ||| || |||| |||
Sbjct: 117 gcgctggatgcagaggtttatcgatcgattcatgtattt-gtgttattctcacaacaaaa 59
Query: 61 tggccaggaagagatcgatgaaccgctgcctccagtgtctt 101
| |||||||||||||||||||||||||||||||||||||
Sbjct: 58 ttctcaggaagagatcgatgaaccgctgcctccagtgtctt 18
>41090_tcc-MIR162:mirbase
Length = 131
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 64 ccaggaagagatcgatgaaccgctgcctccagtgtctt 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 52 ccaggaagagatcgatgaaccgctgcctccagtgtctt 15
>40437_gma-MIR162:mirbase
Length = 102
Score = 75.8 bits (38), Expect = 6e-15
Identities = 84/99 (84%), Gaps = 4/99 (4%)
Strand = Plus / Minus
Query: 4 agcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaattgg 63
|||||||||||||||||||||||||||| |||||| || | || ||||||| | |
Sbjct: 97 agcgctggatgcagaggtttatcgatcgattcatggttctgatgttaaacaacgatt--- 41
Query: 64 ccaggaagagatcgatgaaccgctgcctccagtgtcttc 102
||||||||||||||||||||||||| ||||||| ||||
Sbjct: 40 -caggaagagatcgatgaaccgctgcatccagtgacttc 3
>40342_rco-MIR162:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 85/100 (85%), Gaps = 5/100 (5%)
Strand = Plus / Minus
Query: 3 aagcgctggatgcagaggtttatcgatcggttcatg----tttttcgtgctaaacaa-aa 57
||||||||||||||||||||||||||||| |||||| || || || | |||| ||
Sbjct: 101 aagcgctggatgcagaggtttatcgatcgattcatgcgttttatttttgtttcacaacaa 42
Query: 58 aattggccaggaagagatcgatgaaccgctgcctccagtg 97
||| ||||||||||||||||||||||||||||||||||
Sbjct: 41 aatcttccaggaagagatcgatgaaccgctgcctccagtg 2
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 64 ccaggaagagatcgatgaaccgctgcctccagtg 97
||||||||||||||||||||||||||||||||||
Sbjct: 44 ccaggaagagatcgatgaaccgctgcctccagtg 11
>39813_aly-MIR162b:mirbase
Length = 184
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 aagcgctggatgcagaggtttatcgatcggttcatgttttt 43
||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 138 aagcgctggatgcagaggtttatcgatcgattcatgctttt 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 agcgctggatgcagaggtttatcgatcggttcatgt 39
|||||||||||||||||||||||||||| |||||||
Sbjct: 185 agcgctggatgcagaggtttatcgatcgattcatgt 150
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 64 ccaggaagagatcgatgaaccgctgcctccag 95
||||||||||||||||||||||||||||||||
Sbjct: 99 ccaggaagagatcgatgaaccgctgcctccag 68
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 cgctggatgcagaggtttatcgatcggttcatgttttt 43
||||||||||||||||||||||||| |||||| ||||
Sbjct: 158 cgctggatgcagaggtttatcgatctattcatgctttt 121
>40663_mtr-MIR162:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 8e-11
Identities = 81/96 (84%), Gaps = 5/96 (5%)
Strand = Plus / Minus
Query: 4 agcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaa--aaaatt 61
||||||||||||||||||||||||| || ||||||||| | | | | |||| ||||||
Sbjct: 111 agcgctggatgcagaggtttatcgaccgattcatgtttgttttacgagacaaacaaaatt 52
Query: 62 ggccaggaagagatcgatgaaccgctgcctccagtg 97
|||||| |||||||||||||||||| |||||||
Sbjct: 51 ---caggaacagatcgatgaaccgctgcatccagtg 19
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 65 caggaagagatcgatgaaccgctgcctccag 95
|||||||||||||||||||||||||||||||
Sbjct: 55 caggaagagatcgatgaaccgctgcctccag 25
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 cgctggatgcagaggtttatcgatcggttcatgttttt 43
||||||||||||||||||||||||| |||||| ||||
Sbjct: 111 cgctggatgcagaggtttatcgatctattcatgctttt 74
>41578_vvi-MIR162:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 65 caggaagagatcgatgaaccgctgcctccagtgtcttc 102
||||||||||||||||||||||||| ||||||| ||||
Sbjct: 39 caggaagagatcgatgaaccgctgcatccagtgacttc 2
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 cgctggatgcagaggtttatcga 28
|||||||||||||||||||||||
Sbjct: 95 cgctggatgcagaggtttatcga 73
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 4 agcgctggatgcagaggtttatcgatcg 31
||||||||||||||||||||||||||||
Sbjct: 103 agcgctggatgcagaggtttatcgatcg 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 gatcgatgaaccgctgcctccag 95
|||||||||||||||||||||||
Sbjct: 34 gatcgatgaaccgctgcctccag 12
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 ctggatgcagaggtttatcgatcg 31
||||||||||||||||||||||||
Sbjct: 127 ctggatgcagaggtttatcgatcg 104
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 ctggatgcagaggtttatcgatcg 31
||||||||||||||||||||||||
Sbjct: 163 ctggatgcagaggtttatcgatcg 140
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ggatgcagaggtttatcgatcg 31
||||||||||||||||||||||
Sbjct: 129 ggatgcagaggtttatcgatcg 108
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 8 ctggatgcagaggtttatcga 28
|||||||||||||||||||||
Sbjct: 130 ctggatgcagaggtttatcga 110
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 8 ctggatgcagaggtttatcga 28
|||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcga 79
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 ctggatgcagaggtttatcgatcg 31
||||||||||||| ||||||||||
Sbjct: 124 ctggatgcagaggcttatcgatcg 101
