miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41479_ptc-MIR477b:mirbase
          Length = 85

 Score =  168 bits (85), Expect = 6e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                       
Query: 18  caatctccctcagaggcttccaatatctcagtttatagtaattgcttcaaataatgagaa 77
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caatctccctcagaggcttccaatatctcagtttatagtaattgcttcaaataatgagaa 60

                                    
Query: 78  tgttggatgcctttgggtgagattg 102
           |||||||||||||||||||||||||
Sbjct: 61  tgttggatgcctttgggtgagattg 85




>41478_ptc-MIR477a:mirbase
          Length = 85

 Score =  153 bits (77), Expect = 3e-38
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                       
Query: 18  caatctccctcagaggcttccaatatctcagtttatagtaattgcttcaaataatgagaa 77
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1   caatctccctcagaggcttccaatatctcagtttatagtaattgcttcaaataacgagaa 60

                                    
Query: 78  tgttggatgcctttgggtgagattg 102
           ||||||||||||||||| |||||||
Sbjct: 61  tgttggatgcctttgggggagattg 85




>41257_csi-MIR477c:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 6  tggagaagctcccaatctccctcagaggcttccaatat 43
          |||||||||| |||| |||||||  |||||||||||||
Sbjct: 4  tggagaagcttccaacctccctcgaaggcttccaatat 41




>41255_csi-MIR477a:mirbase
          Length = 140

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 6  tggagaagctcccaatctccctcagaggcttccaatat 43
          |||||||||| |||| |||||||  |||||||||||||
Sbjct: 5  tggagaagcttccaacctccctcgaaggcttccaatat 42




>41685_vvi-MIR477:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 18 caatctccctcagaggcttccaat 41
          |||||||||||| |||||||||||
Sbjct: 9  caatctccctcaaaggcttccaat 32