miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42370_osa-MIR2124a:mirbase
          Length = 249

 Score = 87.7 bits (44), Expect = 5e-18
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||||||| |||| |||||||||| || |||||| || ||||||||||||||||||| 
Sbjct: 71  cgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgctacagtaaat 130

                                           
Query: 171 atcttctaatgatagcttaattaggcttaata 202
           || | |||||||  | ||||||||||||||||
Sbjct: 131 atttgctaatgacggattaattaggcttaata 162




>42079_osa-MIR442:mirbase
          Length = 233

 Score = 81.8 bits (41), Expect = 3e-16
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||||||| ||||||||||||||   | |||||  || ||||||||||||||||||||
Sbjct: 66  cgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaaac 125

                                                    
Query: 171 atcttctaatgatagcttaattaggcttaatagaatcgtct 211
           || | |||||||  | |||||||||||||||| | ||||||
Sbjct: 126 atttgctaatgacggattaattaggcttaataaattcgtct 166



 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           |||||||||||| |||||||||||||
Sbjct: 168 cgagacgaatttattaagcctaatta 143




>42374_osa-MIR2124e:mirbase
          Length = 247

 Score = 73.8 bits (37), Expect = 7e-14
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||||||| ||||||||||||||   | |||||| || |||||||||||||| |||||
Sbjct: 69  cgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctacaataaac 128

                                                    
Query: 171 atcttctaatgatagcttaattaggcttaatagaatcgtct 211
           || | ||||||| || |||||||| | ||||| | ||||||
Sbjct: 129 atttgctaatgacagattaattagacataataaattcgtct 169




>42373_osa-MIR2124d:mirbase
          Length = 250

 Score = 71.9 bits (36), Expect = 3e-13
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           ||||| |||| ||||||||||||||   |||||||| || ||||||||||||||||||| 
Sbjct: 72  cgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtgctacagtaaat 131

                                           
Query: 171 atcttctaatgatagcttaattaggcttaata 202
           || | |||||||    ||||||||||||||||
Sbjct: 132 atttgctaatgacgaattaattaggcttaata 163




>42372_osa-MIR2124c:mirbase
          Length = 248

 Score = 65.9 bits (33), Expect = 2e-11
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||| ||| ||||||| ||||||   | |||||| || || |||||| ||||||||| 
Sbjct: 70  cgagacaaatcttttaagtctaattgcgccatgatttgacaacgtggtggtacagtaaat 129

                                                    
Query: 171 atcttctaatgatagcttaattaggcttaatagaatcgtct 211
           || | |||||||||| |||||||||||||||| | ||||||
Sbjct: 130 atttgctaatgatagattaattaggcttaataaattcgtct 170



 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 110 acgagacgaattttttaagcctaatta 136
           ||||||||||||| |||||||||||||
Sbjct: 173 acgagacgaatttattaagcctaatta 147




>42092_osa-MIR445a:mirbase
          Length = 268

 Score = 60.0 bits (30), Expect = 1e-09
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||||||| |||| || ||||||| || |||||| || |||||| |||||||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaac 126

                                         
Query: 171 atcttctaatgatagcttaattaggcttaa 200
            | |  |||| || | ||||||||||||||
Sbjct: 125 ttttcataattatggattaattaggcttaa 96



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||||||||||||||||||||
Sbjct: 83  cgagacgaattttttaagcctaatta 108




>42378_osa-MIR2124i:mirbase
          Length = 250

 Score = 56.0 bits (28), Expect = 2e-08
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 115 acgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaacatct 174
           |||||| ||||||||||||||   | |||||  || |||||||||||||||||||||| |
Sbjct: 76  acgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaaacattt 135

                                       
Query: 175 tctaatgatagcttaattaggcttaata 202
             |||| || | ||||| ||||||||||
Sbjct: 136 gttaataatggattaatcaggcttaata 163




>42377_osa-MIR2124h:mirbase
          Length = 275

 Score = 56.0 bits (28), Expect = 2e-08
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 151 aatgtggtgctacagtaaacatcttctaatgatagcttaattaggcttaata 202
           |||||||||||||||||||||| | |||| ||  | ||||||||||||||||
Sbjct: 134 aatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaata 185




>42094_osa-MIR445c:mirbase
          Length = 260

 Score = 54.0 bits (27), Expect = 7e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 110 acgagacgaattttttaagcctaattagactatgattag 148
           ||||||||||| ||||||||||||||| || ||||||||
Sbjct: 174 acgagacgaatcttttaagcctaattacaccatgattag 136



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||||||||||||||||||||
Sbjct: 88  cgagacgaattttttaagcctaatta 113




>42099_osa-MIR445h:mirbase
          Length = 277

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||||||||||||||||||||
Sbjct: 96  cgagacgaattttttaagcctaatta 121




>42098_osa-MIR445g:mirbase
          Length = 275

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||||||||||||||||||||
Sbjct: 95  cgagacgaattttttaagcctaatta 120




>42096_osa-MIR445e:mirbase
          Length = 265

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||||||||||||||||||||
Sbjct: 90  cgagacgaattttttaagcctaatta 115




>42155_osa-MIR813:mirbase
          Length = 203

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 61  taaatatagattaatgataaaacccattccataaccc 97
           |||| |||||||| || ||||||||||||||||||||
Sbjct: 203 taaacatagattagtggtaaaacccattccataaccc 167




>42095_osa-MIR445d:mirbase
          Length = 312

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                               
Query: 46 actaattagacgtactaaatatagattaatgataaaacccattccataaccct 98
          |||||||| | ||| |||| ||||| |||||| ||| ||||||||||||||||
Sbjct: 40 actaattaaaagtattaaacatagactaatgacaaaccccattccataaccct 92




>42371_osa-MIR2124b:mirbase
          Length = 239

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 111 cgagacgaattttttaagcctaattagactatgattagataatgtggtgctacagtaaac 170
           |||||| ||| ||||||| ||||||   | |||||| || ||| ||||||||||||||||
Sbjct: 74  cgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaac 133

                                           
Query: 171 atcttctaatgatagcttaattaggcttaata 202
           || | |||||    | ||||||||||||||||
Sbjct: 134 atttgctaataccggattaattaggcttaata 165




>42097_osa-MIR445f:mirbase
          Length = 305

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 gacgaattttttaagcctaatta 136
           |||||||||||||||||||||||
Sbjct: 114 gacgaattttttaagcctaatta 136




>42093_osa-MIR445b:mirbase
          Length = 264

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 111 cgagacgaattttttaagcctaatta 136
           ||||||||| ||||||||||||||||
Sbjct: 89  cgagacgaactttttaagcctaatta 114