miRNEST 2.0, an integrative microRNA resource :: BLAST
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggcatggcgccgcactctacaggaatgcatcaagtgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgccgggcaaatctcctttggcatggcgccgcactctacaggaatgcatcaagtgtta 62
Query: 61 gatattgcgtgtcttagtggctgcatgccaatggaagcttgccctgtaat 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatattgcgtgtcttagtggctgcatgccaatggaagcttgccctgtaat 12
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggcatggcgccgcactctacaggaatgcatcaagtgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgccgggcaaatctcctttggcatggcgccgcactctacaggaatgcatcaagtgtta 62
Query: 61 gatattgcgtgtcttagtggctgcatgccaatggaagcttgccctgtaat 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatattgcgtgtcttagtggctgcatgccaatggaagcttgccctgtaat 12
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
|||||||||||||||||||||||||
Sbjct: 106 attgccgggcaaatctcctttggca 82
>41246_csi-MIR399a:mirbase
Length = 155
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
|||||||||||||||||||||||||
Sbjct: 138 attgccgggcaaatctcctttggca 114
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
|||||||||||||||||||||||||
Sbjct: 120 attgccgggcaaatctcctttggca 96
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
|||||||||||||||||||||||||
Sbjct: 119 attgccgggcaaatctcctttggca 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 76 agtggctgcatgccaatgg-aagcttgccctgtaat 110
||||||||| ||||||||| || |||||||||||||
Sbjct: 52 agtggctgcctgccaatggaaatcttgccctgtaat 17
>40384_rco-MIR399b:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
|||||||||||||||||||||||||
Sbjct: 105 attgccgggcaaatctcctttggca 81
>40385_rco-MIR399c:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 gccgggcaaatctcctttggcatg 27
||||||||||||||||||||||||
Sbjct: 92 gccgggcaaatctcctttggcatg 69
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 74 ttagtggctgcatgccaatggaag-cttgccctgtaat 110
||||||||||| |||||||||| | |||||||||||||
Sbjct: 41 ttagtggctgcctgccaatggaggtcttgccctgtaat 4
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 2 ttgccgggcaaatctcctttggca 25
||||||| ||||||||||||||||
Sbjct: 105 ttgccggacaaatctcctttggca 82
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 105 attgctgggcaaatctcctttggca 81
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 111 attgctgggcaaatctcctttggca 87
>42046_osa-MIR399f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 111 attgctgggcaaatctcctttggca 87
>42045_osa-MIR399e:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 112 attgctgggcaaatctcctttggca 88
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 115 attgcggggcaaatctcctttggca 91
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 101 attgcggggcaaatctcctttggca 77
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 103 attgctgggcaaatctcctttggca 79
>40387_rco-MIR399e:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 107 attgctgggcaaatctcctttggca 83
>40299_bna-MIR399:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ccgggcaaatctcctttggca 25
|||||||||||||||||||||
Sbjct: 101 ccgggcaaatctcctttggca 81
>40097_ath-MIR399f:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ccgggcaaatctcctttggca 25
|||||||||||||||||||||
Sbjct: 108 ccgggcaaatctcctttggca 88
>40095_ath-MIR399d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 94 attgcggggcaaatctcctttggca 70
>39893_aly-MIR399j:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ccgggcaaatctcctttggca 25
|||||||||||||||||||||
Sbjct: 116 ccgggcaaatctcctttggca 96
>39892_aly-MIR399i:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 116 attgcggggcaaatctcctttggca 92
>39891_aly-MIR399h:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ccgggcaaatctcctttggca 25
|||||||||||||||||||||
Sbjct: 102 ccgggcaaatctcctttggca 82
>39890_aly-MIR399g:mirbase
Length = 157
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 135 attgcggggcaaatctcctttggca 111
>39887_aly-MIR399d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 attgccgggcaaatctcctttggca 25
||||| |||||||||||||||||||
Sbjct: 108 attgcggggcaaatctcctttggca 84
>39884_aly-MIR399a:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ccgggcaaatctcctttggca 25
|||||||||||||||||||||
Sbjct: 133 ccgggcaaatctcctttggca 113