miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41695_vvi-MIR845c:mirbase
          Length = 90

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  caattatgtgttttggttgtctgagtttcatgttggcaatttcttaatgattaaacatga 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caattatgtgttttggttgtctgagtttcatgttggcaatttcttaatgattaaacatga 60

                                        
Query: 61 ggctctgataccaattgatgcataaaccat 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 ggctctgataccaattgatgcataaaccat 90




>40169_ath-MIR845a:mirbase
          Length = 163

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  ggctctgataccaattgatgc 81
           |||||||||||||||||||||
Sbjct: 93  ggctctgataccaattgatgc 113




>41697_vvi-MIR845e:mirbase
          Length = 131

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  ggctctgataccaattgatg 80
           ||||||||||||||||||||
Sbjct: 102 ggctctgataccaattgatg 121




>41696_vvi-MIR845d:mirbase
          Length = 131

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  ggctctgataccaattgatg 80
           ||||||||||||||||||||
Sbjct: 102 ggctctgataccaattgatg 121