miRNEST 2.0, an integrative microRNA resource :: BLAST
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 163 bits (82), Expect = 3e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
Query: 72 ggcgtgcgaggagccatgcata 93
||||||||||||||||||||||
Sbjct: 61 ggcgtgcgaggagccatgcata 82
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 73.8 bits (37), Expect = 2e-14
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 8 tgtatgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgt 67
|||||||||||||||||||||||||||||| || |||| || | | ||||||| ||
Sbjct: 17 tgtatgcctggctccctgtatgccatttgcaaagcccatcaagagtccggtggccttcgt 76
Query: 68 ggatggcgtgcgaggagccatgcat 92
||||||| |||||||||||||||||
Sbjct: 77 ggatggcatgcgaggagccatgcat 101
>40019_ath-MIR160a:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 9 gtatgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtg 68
||||||||||||||||||||||||| |||| || |||| |||| | |||| ||| |||
Sbjct: 1 gtatgcctggctccctgtatgccatatgctgagcccatcgagta-tcgatgacctccgtg 59
Query: 69 gatggcgtgcgaggagccatgcatat 94
|||||||| ||||||||||||||||
Sbjct: 60 gatggcgtatgaggagccatgcatat 85
>39807_aly-MIR160a:mirbase
Length = 158
Score = 63.9 bits (32), Expect = 2e-11
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 7 atgtatgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttg 66
||||||||||||||||||||||||||| |||| || ||| |||| | |||| ||| |
Sbjct: 37 atgtatgcctggctccctgtatgccatatgctgagctcatcgagta-tcgatgacctccg 95
Query: 67 tggatggcgtgcgaggagccatgcatat 94
|||||||||| ||||||||||||||||
Sbjct: 96 tggatggcgtatgaggagccatgcatat 123
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccatttgc 37
||||||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccatttgc 36
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 56 gatggcctttgtggatggcgtgcgaggagccatgcatat 94
||||||||| ||||||||||| ||||||||||||||||
Sbjct: 55 gatggccttcgtggatggcgtatgaggagccatgcatat 93
>41529_sly-MIR160a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccatttgc 37
||||||||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgccatttgc 45
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 5e-09
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 71
|||||||||||||||||||||||||| || ||| | || |||||||| ||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggat 70
Query: 72 ggcgtgcgaggagccatgcatatt 95
||||| |||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgcatatt 94
>41219_csi-MIR160:mirbase
Length = 143
Score = 56.0 bits (28), Expect = 5e-09
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 71
|||||||||||||||||||||||||| |||| || | | |||||||| ||||||
Sbjct: 33 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 92
Query: 72 ggcgtgcgaggagccatgcatatt 95
||||| |||||||||||||||||
Sbjct: 93 ggcgtatgaggagccatgcatatt 116
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccatttgc 37
|||||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccatttgc 36
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgc 37
||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgc 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 56 gatggcctttgtggatggcgtgcgaggagccatgcatatt 95
|||||||| ||||||||||| |||||||||||||||||
Sbjct: 55 gatggcctccgtggatggcgtatgaggagccatgcatatt 94
>40312_bra-MIR160a:mirbase
Length = 127
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 tgtatgcctggctccctgtatgccat 33
||||||||||||||||||||||||||
Sbjct: 22 tgtatgcctggctccctgtatgccat 47
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttg 36
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>40658_mtr-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttg 36
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 atggcgtgcgaggagccatgcatattgt 97
||||||||||||||||||||||| ||||
Sbjct: 79 atggcgtgcgaggagccatgcatgttgt 106
>40436_gma-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttg 36
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 cctttgtggatggcgtgcgaggagccatgcatatt 95
|||||||||||||||| ||||||||| |||||||
Sbjct: 70 cctttgtggatggcgtatgaggagccaagcatatt 104
>40339_rco-MIR160a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttg 36
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>42705_zma-MIR160e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 7 tatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 20 tatgcctggctccctgtatgcca 42
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 ggatggcgtgcgaggagccatgcat 92
|||||||||||||||||||| ||||
Sbjct: 88 ggatggcgtgcgaggagccaagcat 112
>41926_osa-MIR160d:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 6 tatgcctggctccctgtatgcca 28
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 ggatggcgtgcgaggagccatgcat 92
|||||||||||||||||||| ||||
Sbjct: 114 ggatggcgtgcgaggagccaagcat 138
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 30 tatgcctggctccctgtatgcca 52
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 ggatggcgtgcgaggagccatgcat 92
|||||||||||||||||||| ||||
Sbjct: 119 ggatggcgtgcgaggagccaagcat 143
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 cctttgtggatggcgtgcgaggagccatgcatatt 95
|||||||||||||||| ||||||||| |||||||
Sbjct: 55 cctttgtggatggcgtatgaggagccaagcatatt 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccat 33
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 cctttgtggatggcgtgcgaggagccatgcatatt 95
|||||||||||||||| ||||||||| |||||||
Sbjct: 55 cctttgtggatggcgtatgaggagccaagcatatt 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccat 33
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>42706_zma-MIR160f:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcc 31
||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgcttag 41
||||||||||||||||||||| | ||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttag 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 ggatggcgtgcgaggagcca 87
||||||||||||||||||||
Sbjct: 77 ggatggcgtgcgaggagcca 96
>41927_osa-MIR160e:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcc 31
||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcc 30
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgc 37
|||||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgcatgccatttgc 36
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccat 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccatttgc 37
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccat 33
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>39374_pab-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 atgtatgcctggctccctgtatgcca 32
|||| |||||||||||||||||||||
Sbjct: 9 atgtgtgcctggctccctgtatgcca 34
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
