miRNEST 2.0, an integrative microRNA resource :: BLAST
>30035_hsa-mir-5096:mirbase
Length = 70
Score = 77.8 bits (39), Expect = 9e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 162 ggggtttcatcatgttggccaggctggtctcaaactcctgacgtcaggcgatcca 216
||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 10 ggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatcca 64
>31332_ppy-mir-1273:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 9e-12
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| | |||||||||||||||||| ||| ||||| ||||||
Sbjct: 79 acccaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccgggttc 20
Query: 73 aagcgattctcctg 86
|||| |||||||||
Sbjct: 19 aagcaattctcctg 6
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 9e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttca 73
|||||||| |||| || ||| || ||||||||||||||||| ||| || || |||||||
Sbjct: 78 cccaggctggagtgcagtggcgcaatcttggctcactgcaacctccaccacccgggttca 19
Query: 74 agcgattctcctg 86
||| |||||||||
Sbjct: 18 agcaattctcctg 6
>30549_ptr-mir-619:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 9e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 355 cacggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 51 cacggtggctcatgcctgtaatcccagcattttgggaggctgagg 7
>28878_hsa-mir-566:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 3e-08
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| || |||||| |||||||||||||||| ||| |||||||| ||||
Sbjct: 94 gctcactgcaaccttcgcctcccgggttcaagcgattctgctgccccagcctcctgagta 35
Query: 102 gctgggattacaggcactcgccaccac 128
| |||||| |||||| | |||||||||
Sbjct: 34 gttgggatcacaggcgcccgccaccac 8
>30505_ptr-mir-566:mirbase
Length = 93
Score = 56.0 bits (28), Expect = 3e-08
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| || |||||| |||||||||||||||| ||| |||||||| ||||
Sbjct: 93 gctcactgcaaccttcgcctcccgggttcaagcgattctgctgccccagcctcctgagta 34
Query: 102 gctgggattacaggcactcgccaccac 128
| |||||| |||||| | |||||||||
Sbjct: 33 gttgggatcacaggcgcccgccaccac 7
>28058_mml-mir-619:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 1e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 49 cggtggctcatgcctgtaatcccagcattttgggaggctgagg 7
>31198_ppy-mir-619:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 1e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 357 cggtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 49 cggtggctcatgcctgtaatcccagcattttgggaggctgagg 7
>29126_hsa-mir-1273d:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 36 cgatcttggctcactgcaaactctgcctcctgggttcaagcgattc 81
|||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 46 cgatcttggctcactgcagcctcaacctcatgggttcaagcgattc 1
>29127_hsa-mir-1273e:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-07
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 13 acccaggctagagtccaatggtgcgatcttggctcactgcaaactctgcctcctgggttc 72
||||||||| |||| || ||| |||||| ||||||||||| ||| | ||||||||||
Sbjct: 79 acccaggctggagtacagtggctcgatctcggctcactgcagcctccacttcctgggttc 20
Query: 73 aagcgattctcctg 86
|||| |||||||||
Sbjct: 19 aagcaattctcctg 6
>28935_hsa-mir-619:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 359 gtggctcaggcctgtaatcccaacactttgagaggctgagg 399
|||||||| ||||||||||||| || |||| ||||||||||
Sbjct: 47 gtggctcatgcctgtaatcccagcattttgggaggctgagg 7
>29505_hsa-mir-3929:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 2e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 226 gcctcccaaagtgctggaatttcaggtgtgagccact 262
||||||||||||||||| ||| | |||||||||||||
Sbjct: 37 gcctcccaaagtgctgggattactggtgtgagccact 1
>29141_hsa-mir-1285-1:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 174 tgttggccaggctggtctcaaactcctg 201
||||| ||||||||||||||||||||||
Sbjct: 22 tgttgcccaggctggtctcaaactcctg 49
>30698_ptr-mir-1285:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 8e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 174 tgttggccaggctggtctcaaactcctg 201
||||| ||||||||||||||||||||||
Sbjct: 22 tgttgcccaggctggtctcaaactcctg 49
>31147_ppy-mir-566:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 8e-06
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 44 gctcactgcaaactctgcctcctgggttcaagcgattctcctg--tcagcctcccaagta 101
||||||||||| || |||||| |||||||||| ||||| ||| |||||||| ||||
Sbjct: 90 gctcactgcaaccttcgcctcccgggttcaagcaattctgctgccccagcctcctgagta 31
Query: 102 gctgggattacaggcactcgccaccac 128
| |||||| |||||| | |||||||||
Sbjct: 30 gttgggatcacaggcgcccgccaccac 4
>29270_hsa-mir-3135b:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 3e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 557 aggagttcaaggctgcagtgagctatgactg 587
|||||||| |||||||||||||||| |||||
Sbjct: 63 aggagttcgaggctgcagtgagctaggactg 33
>31328_ppy-mir-1268:mirbase
Length = 52
Score = 46.1 bits (23), Expect = 3e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 87 tcagcctcccaagtagctgggattacaggcactcgccaccacacccagcta 137
|||||||||||||||||||||| |||||| | | ||||||| ||| ||||
Sbjct: 51 tcagcctcccaagtagctgggaccacaggcgcccaccaccacgcccggcta 1
>29310_hsa-mir-3159:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 1e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 347 gggcggggcacggtggctcaggcctgtaatccca 380
|||| |||||| |||||||| |||||||||||||
Sbjct: 32 gggctgggcacagtggctcacgcctgtaatccca 65
Score = 42.1 bits (21), Expect = 5e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 231 ccaaagtgctggaatttcaggtgtgagccactgtgcc 267
||||| |||||| ||| |||| |||||||||||||||
Sbjct: 74 ccaaaatgctgggattacaggcgtgagccactgtgcc 38
>31341_ppy-mir-1285a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 180 ccaggctggtctcaaactcctg 201
||||||||||||||||||||||
Sbjct: 28 ccaggctggtctcaaactcctg 49
>29198_hsa-mir-1972-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 254 tgagccactgtgcctggcctg 274
|||||||||||||||||||||
Sbjct: 69 tgagccactgtgcctggcctg 49
>29199_hsa-mir-1972-2:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 254 tgagccactgtgcctggcctg 274
|||||||||||||||||||||
Sbjct: 69 tgagccactgtgcctggcctg 49
>30688_ptr-mir-1273:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 5e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 14 cccaggctagagtccaatggtgcgatcttggctcactgcaa 54
|||||||| |||| || ||| || |||||||||||||||||
Sbjct: 78 cccaggctggagtgcagtggcgcaatcttggctcactgcaa 38
