miRNEST 2.0, an integrative microRNA resource :: BLAST
>40339_rco-MIR160a:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 2e-09
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 18 ttgtgtgcctggctccttgtatgccacttgcaaagttcatcagtaatttggtgaaactca 77
|||||||||||||||| ||||||||| ||| ||||||||||| | |||||| |||
Sbjct: 1 ttgtgtgcctggctccctgtatgccatttgtgaagttcatcagaagcttggtg-gtctcc 59
Query: 78 gtagatggcattcaaggagtcaggcatgctgct 110
| ||||||||| ||||||| || ||||||||||
Sbjct: 60 gcagatggcatgcaaggagccatgcatgctgct 92
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 23 tgcctggctccttgtatgccacttgcaaagt 53
||||||||||| ||||||||| |||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcaaagt 41
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 18 ttgtgtgcctggctccttgtatgccacttgcaaag 52
|||| ||||||||||| ||||||||| ||||||||
Sbjct: 16 ttgtatgcctggctccctgtatgccatttgcaaag 50
>40658_mtr-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 17 attgtgtgcctggctccttgtatgccacttgcaaagttcatca 59
|||| |||||||||||| ||||||||| ||| | |||||||||
Sbjct: 15 attgcgtgcctggctccctgtatgccatttgtagagttcatca 57
>42702_zma-MIR160b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tgtgtgcctggctccttgtatgccac 44
||||||||||||||| ||||||||||
Sbjct: 17 tgtgtgcctggctccctgtatgccac 42
>41529_sly-MIR160a:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 tgcctggctccttgtatgccacttgcaaag 52
||||||||||| ||||||||| ||||||||
Sbjct: 20 tgcctggctccctgtatgccatttgcaaag 49
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 19 tgtgtgcctggctccttgtatgccacttgcaaagttcatcag 60
||||||||||||||| || |||||| ||||| || |||||||
Sbjct: 7 tgtgtgcctggctccctgcatgccatttgcatagctcatcag 48
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tgcctggctccttgtatgccacttgc 48
||||||||||| ||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39374_pab-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tgtgtgcctggctccttgtatgccac 44
||||||||||||||| ||||||||||
Sbjct: 10 tgtgtgcctggctccctgtatgccac 35
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccact 45
||||||||||||| |||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccact 45
||||||||||||| |||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccact 31
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccact 45
||||||||||||| |||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 gtgtgcctggctccttgtatgccac 44
|||||||||||||| ||||||||||
Sbjct: 1 gtgtgcctggctccctgtatgccac 25
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccact 45
||||||||||||| |||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccact 53
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccacttgca 49
||||||||||||| ||||||||| |||||
Sbjct: 9 tgtgcctggctccctgtatgccatttgca 37
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccacttgca 49
||||||||||||| ||||||||| |||||
Sbjct: 9 tgtgcctggctccctgtatgccatttgca 37
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccacttgca 49
||||||||||||| ||||||||| |||||
Sbjct: 31 tgtgcctggctccctgtatgccatttgca 59
>39461_ppt-MIR160g:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tgcctggctccttgtatgcca 43
|||||||||||||||||||||
Sbjct: 30 tgcctggctccttgtatgcca 50
>41924_osa-MIR160b:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 gtgcctggctccttgtatgccact 45
|||||||||||| |||||||||||
Sbjct: 29 gtgcctggctccctgtatgccact 52
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccac 44
||||||||||||| ||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgtgcctggctccttgtatgccac 44
||||||||||||| ||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccac 32
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtgtgcctggctccttgtatgcca 43
|||||||||||||| |||||||||
Sbjct: 3 gtgtgcctggctccctgtatgcca 26
>39462_ppt-MIR160h:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 gcctggctccttgtatgcca 43
||||||||||||||||||||
Sbjct: 30 gcctggctccttgtatgcca 49