miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                       
Query: 18  ttgtgtgcctggctccttgtatgccacttgcaaagttcatcagtaatttggtgaaactca 77
           |||||||||||||||| ||||||||| |||  ||||||||||| |  ||||||   ||| 
Sbjct: 1   ttgtgtgcctggctccctgtatgccatttgtgaagttcatcagaagcttggtg-gtctcc 59

                                            
Query: 78  gtagatggcattcaaggagtcaggcatgctgct 110
           | ||||||||| ||||||| || ||||||||||
Sbjct: 60  gcagatggcatgcaaggagccatgcatgctgct 92




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 23 tgcctggctccttgtatgccacttgcaaagt 53
          ||||||||||| ||||||||| |||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcaaagt 41




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 18 ttgtgtgcctggctccttgtatgccacttgcaaag 52
          |||| ||||||||||| ||||||||| ||||||||
Sbjct: 16 ttgtatgcctggctccctgtatgccatttgcaaag 50




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 17 attgtgtgcctggctccttgtatgccacttgcaaagttcatca 59
          |||| |||||||||||| ||||||||| ||| | |||||||||
Sbjct: 15 attgcgtgcctggctccctgtatgccatttgtagagttcatca 57




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 19 tgtgtgcctggctccttgtatgccac 44
          ||||||||||||||| ||||||||||
Sbjct: 17 tgtgtgcctggctccctgtatgccac 42




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 23 tgcctggctccttgtatgccacttgcaaag 52
          ||||||||||| ||||||||| ||||||||
Sbjct: 20 tgcctggctccctgtatgccatttgcaaag 49




>41312_ptc-MIR160h:mirbase
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 19 tgtgtgcctggctccttgtatgccacttgcaaagttcatcag 60
          ||||||||||||||| || |||||| ||||| || |||||||
Sbjct: 7  tgtgtgcctggctccctgcatgccatttgcatagctcatcag 48




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 23 tgcctggctccttgtatgccacttgc 48
          ||||||||||| ||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 19 tgtgtgcctggctccttgtatgccac 44
          ||||||||||||||| ||||||||||
Sbjct: 10 tgtgtgcctggctccctgtatgccac 35




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 tgtgcctggctccttgtatgccact 45
          ||||||||||||| |||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccact 29




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 tgtgcctggctccttgtatgccact 45
          ||||||||||||| |||||||||||
Sbjct: 7  tgtgcctggctccctgtatgccact 31




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 tgtgcctggctccttgtatgccact 45
          ||||||||||||| |||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccact 29




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 20 gtgtgcctggctccttgtatgccac 44
          |||||||||||||| ||||||||||
Sbjct: 1  gtgtgcctggctccctgtatgccac 25




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 tgtgcctggctccttgtatgccact 45
          ||||||||||||| |||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccact 53




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 21 tgtgcctggctccttgtatgccacttgca 49
          ||||||||||||| ||||||||| |||||
Sbjct: 9  tgtgcctggctccctgtatgccatttgca 37




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 21 tgtgcctggctccttgtatgccacttgca 49
          ||||||||||||| ||||||||| |||||
Sbjct: 9  tgtgcctggctccctgtatgccatttgca 37




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 21 tgtgcctggctccttgtatgccacttgca 49
          ||||||||||||| ||||||||| |||||
Sbjct: 31 tgtgcctggctccctgtatgccatttgca 59




>39461_ppt-MIR160g:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 tgcctggctccttgtatgcca 43
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccttgtatgcca 50




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 22 gtgcctggctccttgtatgccact 45
          |||||||||||| |||||||||||
Sbjct: 29 gtgcctggctccctgtatgccact 52




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 21 tgtgcctggctccttgtatgccac 44
          ||||||||||||| ||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 21 tgtgcctggctccttgtatgccac 44
          ||||||||||||| ||||||||||
Sbjct: 9  tgtgcctggctccctgtatgccac 32




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 20 gtgtgcctggctccttgtatgcca 43
          |||||||||||||| |||||||||
Sbjct: 3  gtgtgcctggctccctgtatgcca 26




>39462_ppt-MIR160h:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 gcctggctccttgtatgcca 43
          ||||||||||||||||||||
Sbjct: 30 gcctggctccttgtatgcca 49