miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||||| || |||||||||| || ||
Sbjct: 18 gggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctctaccca 76
Query: 74 tgcactgcctcttccctggctt 95
||||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggctt 98
>40391_rco-MIR408:mirbase
Length = 92
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 7 aaaggctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggct 66
|||| |||||||||||||| ||||||||| |||| ||||||||| ||||||||||||
Sbjct: 1 aaagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggct 60
Query: 67 tcactcatgcactgcctcttccctggcttc 96
|| | |||||||||||||||||||||||
Sbjct: 61 ctacccctgcactgcctcttccctggcttc 90
>41252_csi-MIR408:mirbase
Length = 153
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| | | |||||||| |||||||||||||| | | ||
Sbjct: 63 gggaacaggcagagcatggatggaaccattaacaggt--tctctgttttggctcctccca 120
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 121 tgcactgcctcttccctggct 141
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 ctcatgcactgcctcttccctggcttc 96
|||||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggcttc 116
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ctcatgcactgcctcttccctggct 94
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 ctgggaacaggcagagcatg 31
||||||||||||||||||||
Sbjct: 21 ctgggaacaggcagagcatg 40
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ctcatgcactgcctcttccctggct 94
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 ctgggaacaggcagagcatg 31
||||||||||||||||||||
Sbjct: 21 ctgggaacaggcagagcatg 40
>40108_ath-MIR408:mirbase
Length = 218
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 54 ctctgttttggcttcactcatgcactgcctcttccctggct 94
|||||||||| || || |||||||||||||||||||||||
Sbjct: 101 ctctgttttgtctctacccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 54 ctctgttttggcttcactcatgcactgcctcttccctggct 94
|||||||||| || || |||||||||||||||||||||||
Sbjct: 98 ctctgttttgtctctacccatgcactgcctcttccctggct 138
>41683_vvi-MIR408:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 catgcactgcctcttccctggct 94
|||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggct 98
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 72 catgcactgcctcttccctggct 94
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 atgcactgcctcttccctggct 94
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 atgcactgcctcttccctggct 94
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggct 179
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42465_sof-MIR408d:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggct 197
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
