miRNEST 2.0, an integrative microRNA resource :: BLAST
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 155 bits (78), Expect = 9e-39
Identities = 103/110 (93%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 gatctaatcaaggttgtgctgtgcctggctccctgtatgccacacatgtagcccaaccca 60
||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10 gatctgatcaagactgtgctgtgcctggctccctgtatgccacacatgtagcccagccca 69
Query: 61 agaatgtgg-ttgcctgctgtgggtggcgtgcaaggtgccaagcatgcat 109
|||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 70 tgaatgtggtttgcctgctgtgggtggcgtgcaaggagccaagcatgcat 119
>42707_zma-MIR160g:mirbase
Length = 86
Score = 105 bits (53), Expect = 8e-24
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 81
|||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||
Sbjct: 2 tgcctggctccctgtatgccacacatgtagcccaacccgtg-atgtgattggatgctgtg 60
Query: 82 ggtggcgtgcaaggtgccaagcatg 106
|||||||||||||| ||||||||||
Sbjct: 61 ggtggcgtgcaaggagccaagcatg 85
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 103 bits (52), Expect = 3e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaaccca-agaatgtggttgcctgctgt 80
||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccatatgctaaggttgcctgctgt 60
Query: 81 gggtggcgtgcaaggtgccaagca 104
||||||||||||||| ||||||||
Sbjct: 61 gggtggcgtgcaaggggccaagca 84
>42701_zma-MIR160a:mirbase
Length = 104
Score = 97.6 bits (49), Expect = 2e-21
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccacacatgtagc--ccaaccca-agaatgtggttgcctgc 77
|||||||||||||||||||||||||||||||| |||||||| | | ||||||||||
Sbjct: 9 gtgcctggctccctgtatgccacacatgtagcgcccaacccagatgytaaggttgcctgc 68
Query: 78 tgtgggtggcgtgcaaggtgccaagcatgcat 109
|||||||||||||||||| |||||||||||||
Sbjct: 69 tgtgggtggcgtgcaaggggccaagcatgcat 100
>41924_osa-MIR160b:mirbase
Length = 139
Score = 93.7 bits (47), Expect = 3e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgt 80
||||||||||||||||||||||| |||||||||||| ||| | |||| ||| ||||||
Sbjct: 29 gtgcctggctccctgtatgccactcatgtagcccaatccatg-gtgtgtttggatgctgt 87
Query: 81 gggtggcgtgcaaggtgccaagcatgc 107
||||||||||||||| |||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcatgc 114
>42702_zma-MIR160b:mirbase
Length = 121
Score = 85.7 bits (43), Expect = 7e-18
Identities = 81/91 (89%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctg 79
|||||||||||||||||||||||||||||||| ||||||| | ||| ||| |||||
Sbjct: 19 tgtgcctggctccctgtatgccacacatgtag-ccaacccgtg-gcgtgattggatgctg 76
Query: 80 tgggtggcgtgcaaggtgccaagcatgcata 110
|||||||||||||||| ||||||||||||||
Sbjct: 77 tgggtggcgtgcaaggagccaagcatgcata 107
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 85.7 bits (43), Expect = 7e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 81
|||||||||||||||||||||||||||||||||||||| | ||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccgtg-gcgtgattggatgctgtg 59
Query: 82 ggtggcgtgcaaggtgccaagca 104
|||||||||||||| ||||||||
Sbjct: 60 ggtggcgtgcaaggagccaagca 82
>41923_osa-MIR160a:mirbase
Length = 88
Score = 83.8 bits (42), Expect = 3e-17
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacacatgtagcccaaccca-agaatgtggttgcctgct 78
|||||||||||||||||||||||||||||||| |||||||| | | ||||||||| |
Sbjct: 2 tgtgcctggctccctgtatgccacacatgtagaccaacccatggtgtctggttgcctac- 60
Query: 79 gtgggtggcgtgcaaggtgccaagcatgc 107
|||||||||||||||| |||||||||||
Sbjct: 61 -tgggtggcgtgcaaggagccaagcatgc 88
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 83.8 bits (42), Expect = 3e-17
Identities = 79/90 (87%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgt 80
|||||||||||||||||||||||||||||||||| | || | | ||||| ||||||
Sbjct: 30 gtgcctggctccctgtatgccacacatgtagcccgatccgtg-ccgaggttggatgctgt 88
Query: 81 gggtggcgtgcaaggtgccaagcatgcata 110
||||||||||||||| ||||||||||||||
Sbjct: 89 gggtggcgtgcaaggagccaagcatgcata 118
>41869_far-MIR160:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgt 49
||||||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacacatgt 80
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacac 45
||||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccacac 34
>39374_pab-MIR160a:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccaca 44
|||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccaca 36
>42703_zma-MIR160c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccac 30
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>40020_ath-MIR160b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccaca 44
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccaca 44
||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>41219_csi-MIR160:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccaca 28
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>42705_zma-MIR160e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>42704_zma-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>42636_tae-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41926_osa-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccac 53
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgcca 42
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gcctggctccctgtatgccac 43
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
